DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5592 and sv2b

DIOPT Version :9

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_002933355.1 Gene:sv2b / 100497731 XenbaseID:XB-GENE-6041859 Length:711 Species:Xenopus tropicalis


Alignment Length:573 Identity:102/573 - (17%)
Similarity:186/573 - (32%) Gaps:215/573 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 ATEYNWVCDKRDFGTYSVVVYFVGCIVGCLCFGFITDHSGRLPALFLANSCSMIGGCVSVVCKDF 190
            :.|.:....:.:.|...::|| :|.::|...:|.:.|..||...|.::.:.:.....||...:.:
 Frog   163 SAEKDMCLSRSNKGMLGLIVY-LGMMLGAFVWGGLADKVGRKKCLIISLTINAAFSFVSSFVQGY 226

  Fly   191 PCFAASRFVAGLSMNYCFVPIYILTLENVGIKYRTLVGNLA-LTFFFTLGA--------CLLP-- 244
            ..|...|.::|..:......::....|.:..:.|.  .:|: |..|:.:||        .::|  
 Frog   227 GLFLFCRLISGFGIGGSLPIVFAYFSEFLAREKRG--EHLSWLCMFWMIGAVYAAAMAWSIIPHY 289

  Fly   245 -W-----LAYVISNWRHYAMVVALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEA----AK 299
             |     ..|...:||.:.::..||.:..|:.....||||.:|:..||.|....::|..    .:
 Frog   290 GWGFSMGTHYHFHSWRVFVVICVLPCIASIIALKFMPESPRFLLETGKHDEAWMILKNIHDTNMR 354

  Fly   300 ANGK--------------------------------------IISEEVWSEMRECYELKFANEQL 326
            |.|:                                      .:.:::|..|..|:..:|....:
 Frog   355 AKGEPEKVFTVSHIKTPKQPDEFIEIQSSTGTWFQRWFVRIMTVIKQIWENMLHCFSGQFRKNTI 419

  Fly   327 GKQYTSLDLFKTFPRLVVLTILIVTWMTVALAY---------------------------DAHVR 364
                                .|.|.|.|::|:|                           |.:|:
 Frog   420 --------------------FLAVVWFTMSLSYYGLTVWFPDTIRYLQDEDYASKVKRFTDENVK 464

  Fly   365 ---------------------------------------------------VVE--------ILD 370
                                                               :.|        ..:
 Frog   465 NFNFNFTLENQIHEDGEYYNDRFYKMKLKYVTFKDSLFDECYFEDVTSTGSIFENCTIQNTVFYN 529

  Fly   371 TDIF-----------ITFS-----------------------LSSLVEIPAGIVPMLLLDRIGRK 401
            ||::           :|||                       |.||..:|..|:..||:|:|||.
 Frog   530 TDLYQHKFIDCNFINVTFSQPKEGCHIDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDKIGRI 594

  Fly   402 PMMSAVMLLCAASS--LFVGILKGHWNASTAAIA--ARFFAT--MAYNVGQQWASEILPTVLRGQ 460
            .|::..||:.|...  ||.|      |:.:|.|.  ..|..|  .|:|.......|:.||..|..
 Frog   595 RMIAGSMLISAVCCFFLFFG------NSESAMIGWQCLFCGTSIAAWNALDVVTVELYPTNKRAT 653

  Fly   461 GLAIINIMGQMGALLSPLVLSTH-RYYRPLPMFIITLVSVIGALIILFLPETK 512
            ...|:|.:.::.|:....:.::. ...:.:|:.:.:...|.|.||.|.||||:
 Frog   654 AFGILNGLCKLAAIFGNSIFASFVGITKVIPILLASTALVGGGLISLRLPETR 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 2A0119 17..519 CDD:273328 102/573 (18%)
MFS 141..509 CDD:119392 96/553 (17%)
sv2bXP_002933355.1 synapt_SV2 1..711 CDD:130366 102/573 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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