DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5592 and sv2b

DIOPT Version :10

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_002933355.1 Gene:sv2b / 100497731 XenbaseID:XB-GENE-6041859 Length:711 Species:Xenopus tropicalis


Alignment Length:573 Identity:102/573 - (17%)
Similarity:186/573 - (32%) Gaps:215/573 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 ATEYNWVCDKRDFGTYSVVVYFVGCIVGCLCFGFITDHSGRLPALFLANSCSMIGGCVSVVCKDF 190
            :.|.:....:.:.|...::|| :|.::|...:|.:.|..||...|.::.:.:.....||...:.:
 Frog   163 SAEKDMCLSRSNKGMLGLIVY-LGMMLGAFVWGGLADKVGRKKCLIISLTINAAFSFVSSFVQGY 226

  Fly   191 PCFAASRFVAGLSMNYCFVPIYILTLENVGIKYRTLVGNLA-LTFFFTLGA--------CLLP-- 244
            ..|...|.::|..:......::....|.:..:.|.  .:|: |..|:.:||        .::|  
 Frog   227 GLFLFCRLISGFGIGGSLPIVFAYFSEFLAREKRG--EHLSWLCMFWMIGAVYAAAMAWSIIPHY 289

  Fly   245 -W-----LAYVISNWRHYAMVVALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEA----AK 299
             |     ..|...:||.:.::..||.:..|:.....||||.:|:..||.|....::|..    .:
 Frog   290 GWGFSMGTHYHFHSWRVFVVICVLPCIASIIALKFMPESPRFLLETGKHDEAWMILKNIHDTNMR 354

  Fly   300 ANGK--------------------------------------IISEEVWSEMRECYELKFANEQL 326
            |.|:                                      .:.:::|..|..|:..:|....:
 Frog   355 AKGEPEKVFTVSHIKTPKQPDEFIEIQSSTGTWFQRWFVRIMTVIKQIWENMLHCFSGQFRKNTI 419

  Fly   327 GKQYTSLDLFKTFPRLVVLTILIVTWMTVALAY---------------------------DAHVR 364
                                .|.|.|.|::|:|                           |.:|:
 Frog   420 --------------------FLAVVWFTMSLSYYGLTVWFPDTIRYLQDEDYASKVKRFTDENVK 464

  Fly   365 ---------------------------------------------------VVE--------ILD 370
                                                               :.|        ..:
 Frog   465 NFNFNFTLENQIHEDGEYYNDRFYKMKLKYVTFKDSLFDECYFEDVTSTGSIFENCTIQNTVFYN 529

  Fly   371 TDIF-----------ITFS-----------------------LSSLVEIPAGIVPMLLLDRIGRK 401
            ||::           :|||                       |.||..:|..|:..||:|:|||.
 Frog   530 TDLYQHKFIDCNFINVTFSQPKEGCHIDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDKIGRI 594

  Fly   402 PMMSAVMLLCAASS--LFVGILKGHWNASTAAIA--ARFFAT--MAYNVGQQWASEILPTVLRGQ 460
            .|::..||:.|...  ||.|      |:.:|.|.  ..|..|  .|:|.......|:.||..|..
 Frog   595 RMIAGSMLISAVCCFFLFFG------NSESAMIGWQCLFCGTSIAAWNALDVVTVELYPTNKRAT 653

  Fly   461 GLAIINIMGQMGALLSPLVLSTH-RYYRPLPMFIITLVSVIGALIILFLPETK 512
            ...|:|.:.::.|:....:.::. ...:.:|:.:.:...|.|.||.|.||||:
 Frog   654 AFGILNGLCKLAAIFGNSIFASFVGITKVIPILLASTALVGGGLISLRLPETR 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 MFS_SLC22 113..509 CDD:340875 98/568 (17%)
sv2bXP_002933355.1 synapt_SV2 1..711 CDD:130366 102/573 (18%)

Return to query results.
Submit another query.