DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5592 and sv2a

DIOPT Version :10

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_012825002.1 Gene:sv2a / 100379721 XenbaseID:XB-GENE-968429 Length:729 Species:Xenopus tropicalis


Alignment Length:572 Identity:100/572 - (17%)
Similarity:182/572 - (31%) Gaps:229/572 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 GTYSVVVYFVGCIVGCLCFGFITDHSGRLPALFLANSCSMIGGCVSVVCKDFPCFAASRFVAGLS 203
            |...::|| :|.:||...:|.:.|..||...|.::.|.:.:....|...:.:..|...|.::|:.
 Frog   192 GMLGLIVY-LGMMVGAFLWGGMADRIGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVG 255

  Fly   204 MNYCFVPIY------ILTLENVGIKYRTLVGNLA-LTFFFTLG---ACLLPWL------------ 246
            :... :||.      .|..|..|       .:|: |..|:.:|   |..:.|.            
 Frog   256 IGGS-IPIVFSYFSEFLAQEKRG-------EHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFQMG 312

  Fly   247 -AYVISNWRHYAMVVALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEAAKANGKI------ 304
             ||...:||.:.:|.|.|.||.|......||||.:.:..||.|....|:|:....|.:.      
 Frog   313 SAYQFHSWRVFVLVCAFPSVFAIGALTTMPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPER 377

  Fly   305 ------------------------------------ISEEVWSEMRECYELKFANEQLGKQYTSL 333
                                                :|:|||:...:|:         ..:|..:
 Frog   378 VFSVTQIKTIKQDDELVEIQSDTGALHRRWMIKLLNLSQEVWANFHQCF---------APEYRRI 433

  Fly   334 DLFKTFPRLVVLTILIVTWMTVALAYDA----------HVRVVE--------------------- 367
            .|           :::..|.|::.:|..          |::.::                     
 Frog   434 TL-----------MMMAVWFTMSFSYYGLTVWFPDMIKHLQNIDYASRTKYFHNESVNNFNFNFT 487

  Fly   368 -------------------------------------------------------ILDTDIF--- 374
                                                                   ..:||:|   
 Frog   488 LENQVHRKGEYHNDKFIGLKLKSVIFEDSLFTDCYFEDITSSNTFFKNCSFIRTMFYNTDLFDYK 552

  Fly   375 -------------------ITFS--------------LSSLVEIPAGIVPMLLLDRIGRKPMM-- 404
                               :.||              |.:|..:|..||..||:|:|||..|:  
 Frog   553 FINSKFTNSTFLHSKEGCQLDFSDDINNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAG 617

  Fly   405 SAVMLLCAASSLFVGILKGHWNASTAAIAARFF----ATMAYNVGQQWASEILPTVLRGQGLAII 465
            |:||...:...||.|      |:.:|.||....    :..::|.......|:.|:..|......:
 Frog   618 SSVMSCISCFFLFFG------NSESAMIALLCLFGGVSIASWNALDVLTVELYPSDKRTTAFGFL 676

  Fly   466 NIMGQMGALLSPLVLSTH-RYYRPLPMFIITLVSVIGALIILFLPETKGATM 516
            |.:.::.|:|...:.::. ...:.:|:.:.:....:|:.:.|.||||:|..:
 Frog   677 NALCKLAAVLGISIFTSFVGVAKAVPILLASAALAVGSFLALKLPETRGQVL 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 MFS_SLC22 113..509 CDD:340875 95/563 (17%)
sv2aXP_012825002.1 synapt_SV2 1..729 CDD:130366 100/572 (17%)

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