DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5592 and sv2bb

DIOPT Version :10

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_005161575.1 Gene:sv2bb / 100006427 ZFINID:ZDB-GENE-030131-2789 Length:687 Species:Danio rerio


Alignment Length:541 Identity:101/541 - (18%)
Similarity:181/541 - (33%) Gaps:185/541 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 VVYFVGCIVGCLCFGFITDHSGRLPALFLANSCSMIGGCVSVVCKDFPCFAASRFVAGLSMNYCF 208
            ::.|:|.:.|...:|.:.|..||...|.:..:.:.|....|...:.:..|...|..:|:.:....
Zfish   155 LIVFLGMMFGAFIWGGLADKVGRRKCLIIVLAMNCISAFFSSFAQGYGFFLFFRLFSGIGIGGSV 219

  Fly   209 VPIY-----ILTLENVGIKYRTLVGNLA-LTFFFTLGACLLPWLAYVI----------------S 251
            ..:|     .|.::..|       .:|: |..|:.:|.....:.|:.|                .
Zfish   220 PIVYSYFSEFLQMDKRG-------EHLSWLCMFWMMGGIYASFTAWGIIPRYGWGFSMGTEFQFH 277

  Fly   252 NWRHYAMVVALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEAAKAN--GKIISEEVW--SE 312
            :||.:.:|.|||.:...:..:..||||.:|:...|.|....::|:....|  .|...|:|:  ::
Zfish   278 SWRVFVLVCALPAIAAFVGLMFMPESPRFLLENAKHDEAWMILKQVHDTNWRAKGQPEKVFTVTQ 342

  Fly   313 MR-------ECYELKFANEQLGKQY-------------TSLDLFKTFPRLVVLTILIVTWMTVAL 357
            :|       |..|::.|.....:::             ..|.||....||..|.:.|: |.|:|.
Zfish   343 IRTPKTQEDEFIEIQTATGTAFQRWVVRTLTLTKLVIKNVLSLFGRELRLATLLMAII-WFTMAF 406

  Fly   358 AY--------------------------------------------------------------- 359
            :|                                                               
Zfish   407 SYYGLSVWFPDMIKHLQHEEYESKVKVFHREKVEQFHFNFSLENQVHKEGEYINDKFINIEMKSV 471

  Fly   360 -----------------------DAHVRVVEILDTDIF-----------ITF------------- 377
                                   :..:|.....|||::           :||             
Zfish   472 KFEDSLFVDCFFENVRSTETMFENCTIRSTVFYDTDLYEEKFIDCTMENVTFLHNKKGCHLDYEE 536

  Fly   378 ----------SLSSLVEIPAGIVPMLLLDRIGRKPMMSAVMLLCAASSLFVGILKGHWNASTAAI 432
                      .|.||..:|..|:..|.:|:|||..::...||:.|..:.|:.:     :.|.|||
Zfish   537 DNDVLIYLVSFLGSLAVLPGNIISALFMDKIGRIKIIGGSMLVSAGCTFFLFL-----SFSQAAI 596

  Fly   433 AA---RFF--ATMAYNVGQQWASEILPTVLRGQGLAIINIMGQMGALL-SPLVLSTHRYYRPLPM 491
            .|   .|:  :..|:|..|....|:.|...|......:|.|.::.|:| |.:..|.....:.:|:
Zfish   597 IAWQCLFYGVSVAAWNGIQVITVELYPASKRATAFGFLNAMCKLAAILGSSIFASFIGITKVIPI 661

  Fly   492 FIITLVSVIGALIILFLPETK 512
            .:.....|.|.::.|.||||:
Zfish   662 LLSFAALVSGGVLALKLPETR 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 MFS_SLC22 113..509 CDD:340875 97/536 (18%)
sv2bbXP_005161575.1 synapt_SV2 38..687 CDD:130366 101/541 (19%)

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