DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf133 and H10E21.5

DIOPT Version :9

Sequence 1:NP_937894.1 Gene:Rnf133 / 386611 MGIID:2677436 Length:339 Species:Mus musculus
Sequence 2:NP_497129.1 Gene:H10E21.5 / 175169 WormBaseID:WBGene00019185 Length:473 Species:Caenorhabditis elegans


Alignment Length:360 Identity:87/360 - (24%)
Similarity:143/360 - (39%) Gaps:80/360 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 FWLLRFSFIWLVSQKCCTASAVWTAYMNI------SFHVGNRMLSEL---GETGVFGRSSILKRV 71
            |:|:...|:         .|:|...|.|:      |..|...:.:||   .:.|  |.|:.|...
 Worm    11 FFLIFMRFL---------QSSVDAVYTNVKLQCIDSEEVYGTLQTELTFSNKDG--GGSTFLPAY 64

Mouse    72 AGVVVPP------------EGKIQNACD-----PNTTFIL-----PRNKEPW------IALIERG 108
            ..:..|.            :..|||...     |....|:     |.|:..|      ::.|...
 Worm    65 TDLCAPDMKFDDSQRVFFCKNCIQNCLSRVETAPKNILIVADVKAPNNRVSWFHVQTPVSNIRES 129

Mouse   109 G--CAFTQKIKVASEHGARGVIIYNFPGTGNQVFPMSHQAFEDIVVVMIGNIKAYFTFYHIRRLW 171
            |  |.......:.|........:.:|..|......:|      .:::|:.:: |:..||:::|..
 Worm   130 GKQCNVENSNAMQSPEETSTDALRSFSKTSVLFVSIS------FIILMVISL-AWLVFYYVQRFR 187

Mouse   172 VARIENRRWKRLTRELKKAFGQLQVRVLKEG-DEEVNPNADSCVICFEAYKPNEIVRILTCKHFF 235
            .|..::|..:||....:||..::....:..| .:|:.   ..|.:|.:.|:..:::|:|.|||.:
 Worm   188 YAHAKDRLQRRLFNAARKALTRIPTMTITPGMTQELQ---SDCAVCLDPYQLQDVIRLLPCKHIY 249

Mouse   236 HKNCIDPWILAHGTCPMCKCDILKALGIQMDIEDGTDSLQVLMSNELPGTLSPVEEETNYELPPA 300
            ||:|||||:|.|.||||||.||||..|...||.:..         ::|.....:.::....|...
 Worm   250 HKSCIDPWLLEHRTCPMCKNDILKHFGYWNDIRNDI---------QMPTNSRGIADDFTIRLELG 305

Mouse   301 RTSSKVTHVQEHPTSSANAGSQPPEAEETSHPSHG 335
            .        |||...||:..|  |||...:..|.|
 Worm   306 E--------QEHQAPSADVIS--PEANSDTSDSQG 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf133NP_937894.1 PA_GRAIL_like 43..159 CDD:239037 26/154 (17%)
zf-RING_2 211..254 CDD:290367 21/42 (50%)
H10E21.5NP_497129.1 HRD1 <150..325 CDD:227568 57/203 (28%)
RING-H2_GRAIL 226..273 CDD:319582 25/46 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm16989
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X295
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.970

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