Sequence 1: | NP_937894.1 | Gene: | Rnf133 / 386611 | MGIID: | 2677436 | Length: | 339 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_497129.1 | Gene: | H10E21.5 / 175169 | WormBaseID: | WBGene00019185 | Length: | 473 | Species: | Caenorhabditis elegans |
Alignment Length: | 360 | Identity: | 87/360 - (24%) |
---|---|---|---|
Similarity: | 143/360 - (39%) | Gaps: | 80/360 - (22%) |
- Green bases have known domain annotations that are detailed below.
Mouse 16 FWLLRFSFIWLVSQKCCTASAVWTAYMNI------SFHVGNRMLSEL---GETGVFGRSSILKRV 71
Mouse 72 AGVVVPP------------EGKIQNACD-----PNTTFIL-----PRNKEPW------IALIERG 108
Mouse 109 G--CAFTQKIKVASEHGARGVIIYNFPGTGNQVFPMSHQAFEDIVVVMIGNIKAYFTFYHIRRLW 171
Mouse 172 VARIENRRWKRLTRELKKAFGQLQVRVLKEG-DEEVNPNADSCVICFEAYKPNEIVRILTCKHFF 235
Mouse 236 HKNCIDPWILAHGTCPMCKCDILKALGIQMDIEDGTDSLQVLMSNELPGTLSPVEEETNYELPPA 300
Mouse 301 RTSSKVTHVQEHPTSSANAGSQPPEAEETSHPSHG 335 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rnf133 | NP_937894.1 | PA_GRAIL_like | 43..159 | CDD:239037 | 26/154 (17%) |
zf-RING_2 | 211..254 | CDD:290367 | 21/42 (50%) | ||
H10E21.5 | NP_497129.1 | HRD1 | <150..325 | CDD:227568 | 57/203 (28%) |
RING-H2_GRAIL | 226..273 | CDD:319582 | 25/46 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm16989 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR22765 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X295 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
6 | 5.970 |