DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13287 and Prdm8

DIOPT Version :9

Sequence 1:NP_001261454.1 Gene:CG13287 / 38660 FlyBaseID:FBgn0035643 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_084223.2 Gene:Prdm8 / 77630 MGIID:1924880 Length:688 Species:Mus musculus


Alignment Length:582 Identity:147/582 - (25%)
Similarity:200/582 - (34%) Gaps:245/582 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PQHAELRIST-----SPQQSPQQNQ-----TTNHNNNNETPTSPPGGKTTLKRAFDVAFLMMPDE 76
            |..|.||...     |...:||..|     |.:|....       ||                  
Mouse   168 PYVAHLRFRCPKRLHSTDANPQDEQGGGLGTKDHGGGG-------GG------------------ 207

  Fly    77 RIKQKQAEKQARLQEA-------------LHHH-------------------------HHQQQQQ 103
              |::|.::|.:.|||             :||:                         |:..::.
Mouse   208 --KEQQQQQQQQQQEAPLIPGPKFCKAGPIHHYPASSPEASNPPGSAGAGSAKPSTDFHNLAREL 270

  Fly   104 QMS------------------HYPTDLSPRGTSS-------QPPSPAALE--YISLLEARQRYPQ 141
            :.|                  |...:|||.|.::       :.|..||.|  ...|...|.|:.:
Mouse   271 ENSRGSSSCVAAPGVGSGGSGHQEAELSPDGVATGGCKGKRRFPEEAAAEGGGAGLAGGRARFSE 335

  Fly   142 ISIR--------SPRVYDDPSVVIPLVD-----SPEAPSTSSPPPPMRSAFTKV----------- 182
            ..:.        :|:.|........|.:     :|.:|.|..   ..||||.:|           
Mouse   336 RPLATSKEELVCTPQQYRAAGSYFGLEENGRLFAPPSPETGE---AKRSAFVEVKKAGRAVGLQE 397

  Fly   183 ----------------ASSSLSTSSSSPSTTSRLESPVDAGAPPLSPDQLSCHSISPPLVTPPPR 231
                            |...::...|:.|:|....||   |||             ..|:.|.| 
Mouse   398 EAAATDGAGGTAEDPDAGGGVAGGGSNGSSTPAAGSP---GAP-------------EKLLAPRP- 445

  Fly   232 TNSGGQNPNPLP-ANPIVYHNFRPEYQFNG---------------------------------AF 262
               ||..|..|. .:|.....|....|..|                                 :|
Mouse   446 ---GGSLPGRLEGGSPARGSAFTSVSQLGGGGGAGTAGTAGGSGGGQTAASDERKSAFSQPARSF 507

  Fly   263 QAVNPMQALQAQQRLKQQLLYTRPPGPGNPNGGGPT-----------------MQANSPPGP--- 307
            ..::|:.       |.|:|....|..||  :|.|||                 ...|...||   
Mouse   508 SQLSPLV-------LGQKLGALEPCHPG--DGVGPTRLYPAAADPLAVKLQGAADLNGACGPLAS 563

  Fly   308 --------PSEFLHA---YP--GFAPPPHPFAVSQPLQNPAAAAILSTLIPPTLASTFTLTAQNV 359
                    .|.||:|   :|  ..|......|.:.|||....:|:  ||:||:..| ..|.|||.
Mouse   564 GGGGGLPKQSPFLYATAFWPKSSAAAAAAAAAAAGPLQLQLPSAL--TLLPPSFTS-LCLPAQNW 625

  Fly   360 CAKCNISFRMTSDLVYHMRSHHKSEVACDP-NRRKREEKLRCPVCQETFRERHHLTRHMTAH 420
            |||||.|||||||||||||||||.|.|.:| .:|:|||||:||:|.|:|||||||:||||:|
Mouse   626 CAKCNASFRMTSDLVYHMRSHHKKEYAMEPLVKRRREEKLKCPICNESFRERHHLSRHMTSH 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13287NP_001261454.1 C2H2 Zn finger 360..380 CDD:275368 18/19 (95%)
zf-C2H2_2 363..>418 CDD:289522 41/55 (75%)
C2H2 Zn finger 400..420 CDD:275368 15/19 (79%)
Prdm8NP_084223.2 PR-SET_PRDM8 6..138 CDD:380969
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..309 22/151 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..506 20/128 (16%)
C2H2 Zn finger 626..646 CDD:275368 18/19 (95%)
zf-C2H2 666..687 CDD:333835 15/20 (75%)
C2H2 Zn finger 667..687 CDD:275368 15/19 (79%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849724
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BI9J
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7944
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16516
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6448
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.870

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