DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13287 and Zfp488

DIOPT Version :9

Sequence 1:NP_001261454.1 Gene:CG13287 / 38660 FlyBaseID:FBgn0035643 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_036014633.1 Gene:Zfp488 / 382867 MGIID:2686052 Length:381 Species:Mus musculus


Alignment Length:363 Identity:107/363 - (29%)
Similarity:149/363 - (41%) Gaps:91/363 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 PTDLSPRGTSSQPPSPAALEYISLLEARQ----RYPQISIRSPRVYDDPSVVIPLVDSPEAPSTS 169
            |.|....|..: |..|:..:...|:|.:|    .:.::|               ||||..|....
Mouse    58 PADHMAEGKGA-PLRPSVEKRWKLMEPKQTQAGMFKKMS---------------LVDSDTAAGKG 106

  Fly   170 SPPPPMRSAFTKVASSSLSTSSSSPSTTSRLESPVDAGAPPLSP----DQLSCHSISPPLVTPPP 230
            |    ...|:|::   ||.|:.:.|    ||:.|....|.....    .:|||....|..:....
Mouse   107 S----QDEAYTEL---SLPTAPNKP----RLDRPRACKAYTEQRHNTFTELSCLQERPGDIQAQT 160

  Fly   231 R--TNSGGQ-NPNPLPANPIVYHNFRPEYQFNGAFQAVNPMQALQAQQRLKQQLLYTRP-PGPGN 291
            |  .|..|| .|..||::            |..|........|.....|.:|:..:::| ..|..
Mouse   161 RKLENPEGQLGPQQLPSS------------FLRASGDGTVCSAWPGAPRSEQKSAFSKPAKRPAE 213

  Fly   292 PNGGGPTMQANSPPGPPSEF--------------------------LHAYP-------GFAPPPH 323
            .....|.:.|........|.                          ||...       .|...|.
Mouse   214 KPKRSPMLLAGGSAEGSWELSGLITTVDIPYWAHLSTFKFMGDFWKLHTLSQNILLCNAFQGAPT 278

  Fly   324 PFAVSQPLQNPAAAAILST----LIPPTLASTFTLTAQNVCAKCNISFRMTSDLVYHMRSHHKSE 384
            |:.....:|.|.::|..||    |:|||| |:..|:.||.|||||::||:|:|||:|||||||.|
Mouse   279 PWLEHTQVQAPTSSAPSSTASRALLPPTL-SSLGLSTQNWCAKCNLAFRLTADLVFHMRSHHKRE 342

  Fly   385 -VACDP-NRRKREEKLRCPVCQETFRERHHLTRHMTAH 420
             |..|| ::::|||.|.||||.|.|||||||:|||.:|
Mouse   343 HVGPDPHSKKRREEVLTCPVCHEYFRERHHLSRHMASH 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13287NP_001261454.1 C2H2 Zn finger 360..380 CDD:275368 14/19 (74%)
zf-C2H2_2 363..>418 CDD:289522 37/56 (66%)
C2H2 Zn finger 400..420 CDD:275368 15/19 (79%)
Zfp488XP_036014633.1 C2H2 Zn finger 318..338 CDD:275368 14/19 (74%)
C2H2 Zn finger 360..380 CDD:275368 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849723
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006844
OrthoInspector 1 1.000 - - oto93404
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR16516
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6448
SonicParanoid 1 1.000 - - X7618
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
88.020

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