DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13287 and Zfp488

DIOPT Version :9

Sequence 1:NP_001261454.1 Gene:CG13287 / 38660 FlyBaseID:FBgn0035643 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_006252773.1 Gene:Zfp488 / 290571 RGDID:1309835 Length:338 Species:Rattus norvegicus


Alignment Length:454 Identity:123/454 - (27%)
Similarity:171/454 - (37%) Gaps:160/454 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLMDSMPS-HANPGQRRPTPPQHAELRISTSPQ---QSPQQNQTTNHNNNNETPTSPPG--GKTT 61
            ||..|.|: |...|:|       |.||.|...:   ..|:|.|              ||  .|.|
  Rat     8 LLSLSGPTDHMAEGKR-------ASLRPSVEKRWKLMEPKQTQ--------------PGMLEKMT 51

  Fly    62 L---------KRAFDVAFL----------MMPDERIKQKQAEKQAR--------LQEALHHHHHQ 99
            |         |...|.|:.          :.||..:..|...:|.:        |||.       
  Rat    52 LVDSDAAAAGKEGQDAAYTDLSLSAAPDKLQPDRPLACKACTEQRQNTFTELSCLQER------- 109

  Fly   100 QQQQQMSHYPTDLSPRGTSSQPPSPAALEYISLLEARQRYPQISIRSPRVYDDPSVVIPLVDSPE 164
                     |.|:..:...|:.|           |.:....|:.:...|...|.:|      .|.
  Rat   110 ---------PGDIRAQTRKSENP-----------EGQLGTQQLPVSLLRASGDGTV------CPV 148

  Fly   165 APSTSSPPPPMRSAFTKVASSSLSTSSSSPSTTSRLESPVDAGAPPLSPDQLSCHSISPPLVTPP 229
            .|..:.  ...:|||.|.|......|..||...: :.|..|:.       :||      .|:|  
  Rat   149 WPGAAR--SEQKSAFRKPAKRPAEKSKCSPMLLA-VGSADDSW-------ELS------GLIT-- 195

  Fly   230 PRTNSGGQNPNPLPANPIVYHNFRPEYQFNGAFQAVNPMQALQAQQRLKQQLLYTRPPGPGNPNG 294
                          ...|.|......::|.|.|..::         .|.|.:|.           
  Rat   196 --------------TVDIPYWAHLSTFKFMGDFWKLH---------TLSQNILL----------- 226

  Fly   295 GGPTMQANSPPGPPSEFLHAYPGFAPPPHPFAVSQPLQNPAAAAILS-TLIPPTLASTFTLTAQN 358
                  .|:..|.|:.:|.           ....|.|.:.|::|..| .|:|||| |:..|:.||
  Rat   227 ------CNAFQGAPTPWLE-----------HTQVQALTSSASSATASRALLPPTL-SSLGLSTQN 273

  Fly   359 VCAKCNISFRMTSDLVYHMRSHHKSE-VACDP-NRRKREEKLRCPVCQETFRERHHLTRHMTAH 420
            .|||||::||:|:|||:|||||||.| |..|| ::::|||.|.||||.|.|||||||:||||:|
  Rat   274 WCAKCNLAFRLTADLVFHMRSHHKREHVGPDPHSKKRREEVLTCPVCHEDFRERHHLSRHMTSH 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13287NP_001261454.1 C2H2 Zn finger 360..380 CDD:275368 14/19 (74%)
zf-C2H2_2 363..>418 CDD:289522 37/56 (66%)
C2H2 Zn finger 400..420 CDD:275368 16/19 (84%)
Zfp488XP_006252773.1 C2H2 Zn finger 275..295 CDD:275368 14/19 (74%)
C2H2 Zn finger 317..337 CDD:275368 16/19 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353379
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006844
OrthoInspector 1 1.000 - - otm45372
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR16516
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7618
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.030

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