DRSC/TRiP Functional Genomics Resources

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Protein Alignment KRT15 and LamC

DIOPT Version :9

Sequence 1:XP_011523086.1 Gene:KRT15 / 3866 HGNCID:6421 Length:463 Species:Homo sapiens
Sequence 2:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster


Alignment Length:414 Identity:119/414 - (28%)
Similarity:190/414 - (45%) Gaps:76/414 - (18%)


- Green bases have known domain annotations that are detailed below.


Human   105 EKITMQNLNDRLASYLDKVRALEEANADLEVKIH---DWYQKQTPTSPECDYSQYFKTIEELRDK 166
            ||..:|:||||||.|:|::|.||..|:.|..:::   |...::|....    :.|.|.:...|..
  Fly    46 EKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLK----AVYEKELAAARKL 106

Human   167 IMATTIDNSRVILEIDNARLAADDFRLK------------YENELALRQGVEADING-------- 211
            :..|..:.::  ||||..||..::..||            .||...|.:....::||        
  Fly   107 LDETAKEKAK--LEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLAD 169

Human   212 -----------------LRRVLDEL-------TLARTDLEMQIEGLNEELAYLKKNHEEWVPPIL 252
                             |||.||:|       ||||.|||.|.:.|.||||:..:.|.:.:....
  Fly   170 RKKFEDQAKELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETR 234

Human   253 QEMKEFSSQLAGQVNVEMDAAPGVDLTRVLAEMREQYEAMAEKNRRDVEAWFFSKTEELNKEVAS 317
            ...:...|::.|:::.:.:|    .|.:.|.|:|:|||.....||.::|..:.::.:  |.:.|:
  Fly   235 SRRQIEISEIDGRLSRQYEA----KLQQSLQELRDQYEGQMRINREEIELLYDNEIQ--NLKAAA 293

Human   318 N---------TEMIQTSKTEITDLRRTMQELEIELQSQLSMKAGLENSLAETECRYATQLQQIQG 373
            |         ||.::..:|:|..|...:|.||       ...|||...:.|.|....|:.|:...
  Fly   294 NRAAQGSALATEEVRLMRTKIDGLNAKLQNLE-------DTNAGLNARIRELENLLDTERQRHNQ 351

Human   374 LIGGLEAQLSELRCEMEAQNQEYKMLLDIKTRLEQEIATYRSLLEGQDAKMAGIAIREASSGGGG 438
            .|..|||:|..:|.||..|.|||:.|:|||..|:.|||.|..||.|::.::...:....::..|.
  Fly   352 YIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRPTTDSGI 416

Human   439 SSSNFHINVE-ESVDGQVVSSHKR 461
            ||:..|:... .|..|:|..|.:|
  Fly   417 SSNGSHLTASASSRSGRVTPSGRR 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KRT15XP_011523086.1 Filament 104..423 CDD:278467 110/373 (29%)
LamCNP_001260974.1 Filament 45..401 CDD:278467 110/373 (29%)
ATP-synt_B <67..>142 CDD:304375 18/80 (23%)
MreC <178..>224 CDD:302802 19/45 (42%)
LTD 473..574 CDD:279300
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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