DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18586 and CMR2

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_014736.1 Gene:CMR2 / 854260 SGDID:S000005619 Length:1648 Species:Saccharomyces cerevisiae


Alignment Length:628 Identity:125/628 - (19%)
Similarity:226/628 - (35%) Gaps:183/628 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VASYMR-----NMGLGQTDIVGVMGRHTTHQSAVAYACFFNG---TPLHALHNAYEEACIAKLFG 133
            ||.:::     .:.|...|.:.:|..::....|:..||.:..   .||.::..:..|..:..|..
Yeast  1031 VAGFLKKIVGSKIPLKHGDPIIIMCENSVEYVAMIMACLYCNLLVIPLPSVKESVIEEDLKGLVN 1095

  Fly   134 IT---KPRLIFCDGDEYEKVKSATKDLQVTIVTMRNH----PR----GSVRIQDVLTTPVMQNF- 186
            |.   |.:.:|.|.    |:.|...|..|.....:.:    |:    ..|:.::.||..:.:|. 
Yeast  1096 IIQSYKVKRVFVDA----KLHSLLNDNNVVNKCFKKYKSLIPKITVFSKVKTKNALTVSMFKNVL 1156

  Fly   187 -QPLRLKDG--IDHTLAIL----SSSGTSGFPKAVTIS---NSHKIIVDYMAINNSNIQYT---- 237
             |....|.|  |..|..::    ....||.....:|.|   |:.||:.:.:.:.|::..::    
Yeast  1157 KQKFGAKPGTRIGMTPCVVWVNTEYDVTSNIHVTMTHSSLLNASKIVKETLQLRNNSPLFSICSH 1221

  Fly   238 SSTLDWCSGLSMAITSG----VFSTTSIIADCDFDPGLFCRAIGKYRISMVLL-----------S 287
            :|.|.:.....:.|.:|    :||.|.::.    ||..|...:....:..:.|           :
Yeast  1222 TSGLGFMFSCLLGIYTGASTCLFSLTDVLT----DPKEFLIGLQNLNVKDLYLKLETLYALLDRA 1282

  Fly   288 SSYLAIFANCPE-FESA---DLSSLNYVIFGG------------SSCSLEVQRKVRSRLSHDCLN 336
            ||.:..|.|..| ..||   ...||...:|.|            ...::|...|..|.:|..|..
Yeast  1283 SSLIEGFKNKKENINSAKNNTSGSLREDVFKGVRNIMIPFPNRPRIYTIENILKRYSTISLSCTQ 1347

  Fly   337 FCY-------GLTELNS---AGSVNLNFDE-----------KPNSVGRAIRGIKIKVIDE----- 375
            ..|       .|..|.|   ...|:|..|.           .||.|.   .|..||:.|.     
Yeast  1348 ISYVYQHHFNPLISLRSYLDIPPVDLYLDPFSLREGIIREVNPNDVS---AGNYIKIQDSGVVPV 1409

  Fly   376 -------QGEAQEPNVVGE----------------ICFHNSQKWAGYYKNPDETRQ--------I 409
                   ..|...|.|.||                :|..:..|   .||:|..|.|        :
Yeast  1410 CTDVSVVNPETLLPCVDGEFGEIWCCSEANAFDYFVCNSSKNK---LYKDPFITEQFKSKMKSEV 1471

  Fly   410 QDSENWIHTGDLGYV------DKDG------YLFVIDRLKDMLKYQNIMYYPSEIENVIAEMPNV 462
            .::.:::.|||||::      :..|      .|||:..:.:.::...:.::.|::|..:.::.:.
Yeast  1472 NNTLSYLRTGDLGFIKNVSCTNSQGEVVNLNLLFVLGSIHESIEILGLTHFVSDLERTVKDVHSD 1536

  Fly   463 LEACVF----GI----------WDPVNGDEA---AASLVKKPGTQLEAQDVVEYVR-KRITAKFK 509
            :.:|:.    |:          .:|:.|:..   .:.|:.|.|..|   |:..:|| |.|:.|  
Yeast  1537 IGSCLIAKAGGLLVCLIRCKERHNPILGNLTTLIVSELLNKHGVIL---DLCTFVRTKGISPK-- 1596

  Fly   510 QLNGGALIVDQIVRSGNRKTNRSA-------VKEHFLKNYNNN 545
               ..::|::  |.:.||.:...|       ::..|..||..|
Yeast  1597 ---NSSMIME--VWAKNRASIMQAWFDQKIQIEAQFGINYGEN 1634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 122/622 (20%)
AFD_class_I 55..530 CDD:302604 120/604 (20%)
CMR2NP_014736.1 DMAP_binding 5..121 CDD:368923
AFD_class_I 179..893 CDD:418409
Dip2 1004..1626 CDD:341231 121/618 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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