DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and 4CL1

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_175579.1 Gene:4CL1 / 841593 AraportID:AT1G51680 Length:561 Species:Arabidopsis thaliana


Alignment Length:543 Identity:136/543 - (25%)
Similarity:250/543 - (46%) Gaps:56/543 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MEVKQKLLNAMCTYDDKLKIWSGREAPSLFSPN-LSIGEIIFGD---------MVNNPKLIAQIS 58
            ||.:....|:...:..||        |.::.|| ||:.:.||.:         ::|.|       
plant    12 MEKQSNNNNSDVIFRSKL--------PDIYIPNHLSLHDYIFQNISEFATKPCLINGP------- 61

  Fly    59 ITEDIVLTREDLHMNAMRVASYMRNMGLGQTDIVGVMGRHTTHQSAVAYACFFNGTPLHALHNAY 123
              ...|.|..|:|:.:.::|:....:|:.|.|:|.::..:.........|..|.|....|.:..:
plant    62 --TGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFF 124

  Fly   124 EEACIAKLFGITKPRLIFCDGDEYEKVKSATKDLQVTIVTMRNH-----PRGSVRIQDVL--TTP 181
            ..|.|||....:..:||..:....:|:|....|..|.||.:.::     |.|.:|..::.  ||.
plant   125 TPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTE 189

  Fly   182 VMQNFQPLRLKDGIDHTLAILSSSGTSGFPKAVTISNSHKIIVDYMAI----NNSNIQYTSSTLD 242
            ..:....:.:..  |..:|:..||||:|.||.|.:  :||.:|..:|.    .|.|:.:.|..:.
plant   190 ASEVIDSVEISP--DDVVALPYSSGTTGLPKGVML--THKGLVTSVAQQVDGENPNLYFHSDDVI 250

  Fly   243 WC-------SGLSMAITSGVFSTTSIIADCDFDPGLFCRAIGKYRISMVLLSSSYLAIFANCPEF 300
            .|       ..|:..:..|:....:|:....|:..|....|.:.::::..:....:...|...|.
plant   251 LCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSET 315

  Fly   301 ESADLSSLNYVIFGGSSCSLEVQRKVRSRLSHDCLNFCYGLTELNSAGSVNLNFDEKP-----NS 360
            |..||||:..|..|.:....|::..|.::..:..|...||:||.....:::|.|.::|     .:
plant   316 EKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGA 380

  Fly   361 VGRAIRGIKIKVID-EQGEAQEPNVVGEICFHNSQKWAGYYKNPDETRQIQDSENWIHTGDLGYV 424
            .|..:|..::|::| :.|::...|..||||....|...||..||..|.:..|.:.|:||||:|.:
plant   381 CGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLI 445

  Fly   425 DKDGYLFVIDRLKDMLKYQNIMYYPSEIENVIAEMPNVLEACVFGIWDPVNGDEAAASLVKKPGT 489
            |.|..||::||||:::||:.....|:|:|.::...|::.:..|..:.:...|:...|.:||...:
plant   446 DDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDS 510

  Fly   490 QLEAQDVVEYVRKRITAKFKQLN 512
            :|...||.::|.|::.. :|::|
plant   511 ELSEDDVKQFVSKQVVF-YKRIN 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 130/512 (25%)
AFD_class_I 55..530 CDD:302604 122/482 (25%)
4CL1NP_175579.1 PLN02246 16..560 CDD:215137 134/539 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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