DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and AT1G20480

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_173472.1 Gene:AT1G20480 / 838636 AraportID:AT1G20480 Length:565 Species:Arabidopsis thaliana


Alignment Length:535 Identity:133/535 - (24%)
Similarity:239/535 - (44%) Gaps:47/535 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AEMEVKQKLLNAMCTYDDKLKIWSGREAPSLFSPNLSI------------GEIIFGDMVNNPKLI 54
            :|:|.:...::....:.:...|:..:..|....||..:            |:.:|.|.|...:  
plant    12 SEIESRTLAVDRKSGFCESTSIFYSKREPMALPPNQFLDVTSFIASQPHRGKTVFVDAVTGRR-- 74

  Fly    55 AQISITEDIVLTREDLHMNAMRVASYMRNMGLGQTDIVGVMGRHTTHQSAVAYACFFNGTPLHAL 119
                      |:..:|.:...|||..:..:|:.:.::|.::..::.....|:.:....|..:...
plant    75 ----------LSFPELWLGVERVAGCLYALGVRKGNVVIILSPNSILFPIVSLSVMSLGAIITTA 129

  Fly   120 H--NAYEEACIAKLFGITKPRLIFCDGDEYEKVKSATK-DLQVTIVTMRNHPRGS----VRIQDV 177
            :  |..:|  |:|..|.::|.|.|.......|:.:|:. :|.|.::...:.|..|    |::...
plant   130 NPINTSDE--ISKQIGDSRPVLAFTTCKLVSKLAAASNFNLPVVLMDDYHVPSQSYGDRVKLVGR 192

  Fly   178 LTTPVMQNFQPLRLKDGI--DHTLAILSSSGTSGFPKAVTISNSHKIIVDYMAINNSNI---QYT 237
            |.|.:.......|:|..:  |.|.|:|.||||:|..|.|.:  ||:.::..:....:..   |.|
plant   193 LETMIETEPSESRVKQRVNQDDTAALLYSSGTTGTSKGVML--SHRNLIALVQAYRARFGLEQRT 255

  Fly   238 SSTLDWCS--GLSMAITSGVFSTTSIIADCDFDPGLFCRAIGKYRIS-MVLLSSSYLAIFANCPE 299
            ..|:..|.  |.....|..:....:|:....||......|:..:|.| :.|:....:|:.....|
plant   256 ICTIPMCHIFGFGGFATGLIALGWTIVVLPKFDMAKLLSAVETHRSSYLSLVPPIVVAMVNGANE 320

  Fly   300 FESA-DLSSLNYVIFGGSSCSLEVQRKVRSRLSHDCLNFCYGLTELNSAGSVNLNFDE--KPNSV 361
            ..|. |||||:.|:.||:..|.||..|.........:...|||||..:..:...|.:|  :..:.
plant   321 INSKYDLSSLHTVVAGGAPLSREVTEKFVENYPKVKILQGYGLTESTAIAASMFNKEETKRYGAS 385

  Fly   362 GRAIRGIKIKVID-EQGEAQEPNVVGEICFHNSQKWAGYYKNPDETRQIQDSENWIHTGDLGYVD 425
            |.....::.|::| :.|.....|..||:...:.....||:||.:.|....|||.|:.||||.|:|
plant   386 GLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKGYFKNKEATASTIDSEGWLKTGDLCYID 450

  Fly   426 KDGYLFVIDRLKDMLKYQNIMYYPSEIENVIAEMPNVLEACVFGIWDPVNGDEAAASLVKKPGTQ 490
            .||::||:||||:::|.......|:|:|.::...|.:.:|.|..|.|...|....|.:|:|.|:.
plant   451 GDGFVFVVDRLKELIKCNGYQVAPAELEALLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSN 515

  Fly   491 LEAQDVVEYVRKRIT 505
            |...:::.:|.|:::
plant   516 LSESEIMGFVAKQVS 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 129/502 (26%)
AFD_class_I 55..530 CDD:302604 123/470 (26%)
AT1G20480NP_173472.1 PLN02574 27..562 CDD:215312 131/520 (25%)
4CL 43..557 CDD:213272 129/504 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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