DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and AT4G19010

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_193636.1 Gene:AT4G19010 / 827639 AraportID:AT4G19010 Length:566 Species:Arabidopsis thaliana


Alignment Length:557 Identity:131/557 - (23%)
Similarity:247/557 - (44%) Gaps:64/557 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 YDDKLKIWSGREAPSL---FSPNLSIGEIIF-----GDMVNNPKLIA-QISITEDIVLTREDLHM 72
            :..|..|::.: .|||   ..|||.....:|     ||......|.. .||.||..::.:.    
plant    25 FSSKTGIYTSK-FPSLHLPVDPNLDAVSALFSHKHHGDTALIDSLTGFSISHTELQIMVQS---- 84

  Fly    73 NAMRVASYMRNMGLGQTDIVGVMGRHTTHQSAVAYACFFNGTPLHALHNAYEEACIAKLFGITKP 137
               ..|.....:|:.|.|:|.::..::.:...:..:....|..:..::.:.....|.|.......
plant    85 ---MAAGIYHVLGVRQGDVVSLVLPNSVYFPMIFLSLISLGAIVTTMNPSSSLGEIKKQVSECSV 146

  Fly   138 RLIFCDGDEYEKVKSATKDLQVTIVTM-RNHPRGSVRIQDVLTTPVM-QNF----QPLRLKDGID 196
            .|.|...:..||:.|    |.|::::: .::...|:||::.....:| ::|    :||..:|.: 
plant   147 GLAFTSTENVEKLSS----LGVSVISVSESYDFDSIRIENPKFYSIMKESFGFVPKPLIKQDDV- 206

  Fly   197 HTLAILSSSGTSGFPKAVTISNSHKIIVDYMAI------------NNSNIQYTSSTLDWCSGLSM 249
              .||:.||||:|..|.|.:  :|:.::..|.:            .:||:...:..|....|||:
plant   207 --AAIMYSSGTTGASKGVLL--THRNLIASMELFVRFEASQYEYPGSSNVYLAALPLCHIYGLSL 267

  Fly   250 AITSGVFSTTSIIADCDFDPGLFCRAIGKYRIS--------MVLLSSSYLAIFANCPEFESADLS 306
            .:...:...::|:....||.......|.:::|:        ::.|:.....:   |.|.    ..
plant   268 FVMGLLSLGSTIVVMKRFDASDVVNVIERFKITHFPVVPPMLMALTKKAKGV---CGEV----FK 325

  Fly   307 SLNYVIFGGSSCSLEVQRKVRSRLSHDCLNFCYGLTELNSAGSVNLNFDE--KPNSVGRAIRGIK 369
            ||..|..|.:..|.:........|.|..|...||:||..:.|:...|.::  :.:|||.....::
plant   326 SLKQVSSGAAPLSRKFIEDFLQTLPHVDLIQGYGMTESTAVGTRGFNSEKLSRYSSVGLLAPNMQ 390

  Fly   370 IKVID-EQGEAQEPNVVGEICFHNSQKWAGYYKNPDETRQIQDSENWIHTGDLGYVDKDGYLFVI 433
            .||:| ..|....|...||:.........||..||..|:.....::|:.|||:.|.|:|||||::
plant   391 AKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIV 455

  Fly   434 DRLKDMLKYQNIMYYPSEIENVIAEMPNVLEACVFGIWDPVNGDEAAASLVKKPGTQLEAQDVVE 498
            ||:|:::||:.....|:::|.|:...|.:::|.|....:...|:...|.:|::..|.|..:||:.
plant   456 DRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVIS 520

  Fly   499 YVRKRITAKFKQLNGGALIVDQIVRSGNRKTNRSAVK 535
            ||..:: |.::::. ..::|:.|.:|...|..|..:|
plant   521 YVASQV-APYRKVR-KVVMVNSIPKSPTGKILRKELK 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 126/536 (24%)
AFD_class_I 55..530 CDD:302604 117/504 (23%)
AT4G19010NP_193636.1 PLN02574 9..566 CDD:215312 131/557 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.