DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and 4CL2

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_188761.1 Gene:4CL2 / 821678 AraportID:AT3G21240 Length:556 Species:Arabidopsis thaliana


Alignment Length:544 Identity:128/544 - (23%)
Similarity:252/544 - (46%) Gaps:44/544 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PSLFSPN-LSIGEIIFGD---------MVNNPKLIAQISITEDIVLTREDLHMNAMRVASYMRNM 84
            |.::.|| |.:.:.||.:         ::|.|        |.: |.|..|:|:.:.::|:.:.|:
plant    28 PDIYIPNHLPLHDYIFENISEFAAKPCLINGP--------TGE-VYTYADVHVTSRKLAAGLHNL 83

  Fly    85 GLGQTDIVGVMGRHTTHQSAVAYACFFNGTPLHALHNAYEEACIAKLFGITKPRLIFCDGDEYEK 149
            |:.|.|:|.::..::........|..|.|....:.:..:..|.|:|....:..:||.......:|
plant    84 GVKQHDVVMILLPNSPEVVLTFLAASFIGAITTSANPFFTPAEISKQAKASAAKLIVTQSRYVDK 148

  Fly   150 VKSATKDLQVTIVTMRNH--PRGSVRIQDVLTTPVMQNFQPLRLKDGIDHTLAILSSSGTSGFPK 212
            :|:...| .|.|||..:.  |...:|..: ||.........:..|...:..:|:..||||:|.||
plant   149 IKNLQND-GVLIVTTDSDAIPENCLRFSE-LTQSEEPRVDSIPEKISPEDVVALPFSSGTTGLPK 211

  Fly   213 AVTISNSHKIIVDYMAI----NNSNIQYTSSTLDWC-------SGLSMAITSGVFSTTSIIADCD 266
            .|.:  :||.:|..:|.    .|.|:.:....:..|       ..|:..:...:....:|:....
plant   212 GVML--THKGLVTSVAQQVDGENPNLYFNRDDVILCVLPMFHIYALNSIMLCSLRVGATILIMPK 274

  Fly   267 FDPGLFCRAIGKYRISMVLLSSSYLAIFANCPEFESADLSSLNYVIFGGSSCSLEVQRKVRSRLS 331
            |:..|....|.:.::::.::....:...|..||.|..||||:..|..|.:....|::..:.::..
plant   275 FEITLLLEQIQRCKVTVAMVVPPIVLAIAKSPETEKYDLSSVRMVKSGAAPLGKELEDAISAKFP 339

  Fly   332 HDCLNFCYGLTELNSAGSVNLNFDEKP-----NSVGRAIRGIKIKVID-EQGEAQEPNVVGEICF 390
            :..|...||:||.....:::|.|.::|     .:.|..:|..::|::| :.|::...|..||||.
plant   340 NAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKILDPDTGDSLPRNKPGEICI 404

  Fly   391 HNSQKWAGYYKNPDETRQIQDSENWIHTGDLGYVDKDGYLFVIDRLKDMLKYQNIMYYPSEIENV 455
            ..:|...||..:|..|....|.:.|:||||:|::|.|..||::||||:::||:.....|:|:|::
plant   405 RGNQIMKGYLNDPLATASTIDKDGWLHTGDVGFIDDDDELFIVDRLKELIKYKGFQVAPAELESL 469

  Fly   456 IAEMPNVLEACVFGIWDPVNGDEAAASLVKKPGTQLEAQDVVEYVRKRITAKFKQLNGGALIVDQ 520
            :...|.:.:..|..:.:...|:...|.:|:...:.:...::.::|.|::.. :|::| .....|.
plant   470 LIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSNISEDEIKQFVSKQVVF-YKRIN-KVFFTDS 532

  Fly   521 IVRSGNRKTNRSAVKEHFLKNYNN 544
            |.::.:.|..|..::........|
plant   533 IPKAPSGKILRKDLRARLANGLMN 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 126/534 (24%)
AFD_class_I 55..530 CDD:302604 118/493 (24%)
4CL2NP_188761.1 PLN02246 14..553 CDD:215137 127/539 (24%)
4CL 32..546 CDD:213272 126/528 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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