DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and Acsf3

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_574249.5 Gene:Acsf3 / 498962 RGDID:1586037 Length:583 Species:Rattus norvegicus


Alignment Length:576 Identity:114/576 - (19%)
Similarity:200/576 - (34%) Gaps:168/576 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 YMRNMGLG-QTDIVGVMGRHTTHQSAVAYACFFNGTPLHALHNAYEEACI---AKLFGITKPRLI 140
            ::|.:..| :..::...||||..:......|.            .:|.|.   .|:..:.:.|:.
  Rat    47 FIRALAFGDRVALIDKHGRHTYRELYDRSLCL------------AQEICSLRGCKVGDLQEERVS 99

  Fly   141 F-CDGDEYEKVKSATKDLQ--VTIVTMRNHPRGSVR--IQDVLT-------------TPVMQNF- 186
            | |..|....:......:.  |.:...|.||...:.  |||..:             :|:.|.. 
  Rat   100 FLCSNDVSYVIAQWASWMSGGVAVPLYRKHPEAQLEYFIQDSRSSVVVVGQEYLERLSPLAQRLG 164

  Fly   187 --------------------QPLRLKDGIDHTLAILSSSGTSGFPK----------AVTISNSHK 221
                                ||::.::..|....|..:|||:|.||          ||.....|.
  Rat   165 VPLLPLTPAVYHGAAEKPIEQPIQEREWRDRGAMIFYTSGTTGRPKGALSTHRNLAAVVTGLVHS 229

  Fly   222 -------IIVDYMAINNSN------------------IQYTSSTLDWCSGLS---------MAIT 252
                   :|:..:.:::.:                  :...|:...|...||         ||:.
  Rat   230 WAWTKNDVILHVLPLHHVHGVVNKLLCPLWVGATCVMLPEFSAQQVWEKFLSSEAPQINMFMAVP 294

  Fly   253 SGVFS----------TTSIIADCDFDPGLFCRAIGKYRISMVLLSSSYLAIFANCPEFESADLSS 307
            : ::|          |.|.:.|       |.||:.|.||.:::..|:.|.:    |..|      
  Rat   295 T-IYSKLLDYYDRHFTQSHVQD-------FVRAVCKERIRLMVSGSAALPV----PLLE------ 341

  Fly   308 LNYVIFGGSSCSLEVQRKVRSRLSHDCLNFCYGLTELNSAGSVNLNFDEKPNSVGRAIRGIKIKV 372
                             |.:|...|..|. .||:||:..|.|..|.....|.|||..:.|:::::
  Rat   342 -----------------KWKSATGHTLLE-RYGMTEIGMALSNPLTEARVPGSVGTPLPGVEVRI 388

  Fly   373 IDE------------QGEAQEPNVV-------GEICFHNSQKWAGYYKNPDETRQIQDSENWIHT 418
            :.|            :|..:...|.       ||:.......:..|:..|:||:.....:.|..|
  Rat   389 VSENPQKGSSYTIHAEGNMRGTKVTPGFEEKEGELLVKGPSVFQEYWDKPEETKSAFTPDGWFRT 453

  Fly   419 GDLGYVDKDGYLFVIDRLK-DMLKYQNIMYYPSEIENVIAEMPNVLEACVFGIWDPVNGDEAAAS 482
            ||.. |.||...::..|.. |::|.........|||..:...|::.:..|.|:.|...|....|.
  Rat   454 GDTA-VFKDDRYWIRGRTSVDIIKTGGYKVSALEIERHLLAHPSITDVAVIGVPDMTWGQRVTAV 517

  Fly   483 LVKKPGTQLEAQDVVEYVRKRITAKFKQLNGGALIVDQIVRSGNRKTNRSAVKEHF 538
            :..:.|..|..:|:.|:.| .:.|.: .:....|:|:.|.|:...|.|:..:.:.|
  Rat   518 VALQEGHSLSHRDLKEWAR-GVLAPY-AVPSELLLVEAIPRNQMGKVNKKQLLQQF 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 114/576 (20%)
AFD_class_I 55..530 CDD:302604 112/566 (20%)
Acsf3XP_574249.5 CaiC 49..572 CDD:223395 114/574 (20%)
MCS 55..564 CDD:213307 110/559 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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