DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and CG3961

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster


Alignment Length:578 Identity:115/578 - (19%)
Similarity:205/578 - (35%) Gaps:137/578 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 MNAMRVASYMRNMGLGQTDIVGVMGRHTTHQSAVAYACFFNGTPLHALHNAYEEACIAKLFGITK 136
            :.|....:.|..:|.....::|:..::..........|:.....:..|::.......|.:...|.
  Fly   141 LRAKNFGAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQTD 205

  Fly   137 PRLIFCDGDE-----YEKVKSATKDL-------QVTIVTMR-------------------NHPRG 170
            .:::..:.|.     .||...:.|.:       |.|:...|                   |||..
  Fly   206 MQVVIVEDDGKAAMLLEKAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNHPEV 270

  Fly   171 SVRIQDVLTTPVMQNFQPLRLKDGIDHTLAILSSSGTSGFPKAVTISN---------------SH 220
            ....:|:.|                     :..:|||:|.||.|.:::               .|
  Fly   271 PPTAEDLCT---------------------VCYTSGTTGNPKGVMLTHGNVVAGVCSVILQMGDH 314

  Fly   221 KI-----IVDYMAINN-------SNIQYTSSTLDWCSGLSMAITSGVFSTTSIIADCDFDPGLFC 273
            :|     :|.::.:.:       :.:.|....:.:.||....:|:.:......:...  .|.|..
  Fly   315 RIRAGDVMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMPA--VPRLLN 377

  Fly   274 RAIGKYR--ISMVLLSSSYLAIFANCPEFE---------------------SADLSSLNYVIFGG 315
            |...|.:  ||...|......:.....|.|                     .|...:|..::.|.
  Fly   378 RVYDKIQNDISASGLKRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGNLRLMVVGS 442

  Fly   316 SSCSLEVQRKVRSRLSHDCLNF-CYGLTELNSAGSVNLNFDEKPNSVGRAIRGIKIKVID--EQG 377
            :..:..|...:|..|.  ||.. .||.||...|.::.:..|..||.||..:....:|::|  |..
  Fly   443 APLAGNVLTFMRCALG--CLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKLVDVPEME 505

  Fly   378 EAQEPNVVGEICFHNSQKWAGYYKNPDETRQIQDSENWIHTGDLGYVDKDGYLFVIDRLKDMLKY 442
            .....| .||:|...|..:.||||:|::|.:..|||.|.||||:|....:|.|.:|||.|.:.|.
  Fly   506 YFANQN-TGEVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKL 569

  Fly   443 QNIMY-YPSEIENV--IAEMPN-------VLEACVFGI----------WDPVNGDEAAASLV--K 485
            ....| .|.:|||:  :::..|       .|::|:..:          |...|......|::  .
  Fly   570 SQGEYIVPEKIENIYTLSQYVNQVYVYGESLKSCIIAVVVPDTDVLKQWATENNVRGTLSVLCNN 634

  Fly   486 KPGTQLEAQDVVEYVRKRITAKFKQLNGGALIVDQI-VRSG----NRKTNRSAVKEHF 538
            |...:|...|::.:.::.....|:|:....|..|.. |::|    ..|..|..:|.:|
  Fly   635 KNVKELIMNDMLNWGKQSGLKSFEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYF 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 115/578 (20%)
AFD_class_I 55..530 CDD:302604 112/568 (20%)
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 115/578 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452245
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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