DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18586 and hll

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster


Alignment Length:690 Identity:134/690 - (19%)
Similarity:236/690 - (34%) Gaps:250/690 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KLKIWSGREAPSLFS---PNLSIGEII------FGDMVNNPKLIAQISITED---IVLTREDLHM 72
            ||::    :.||.||   |..:|.|..      :.|:   |.|:.:...:.:   ..||..:...
  Fly    20 KLRL----DEPSSFSQTVPPQTIPEFFKESCEKYSDL---PALVWETPGSGNDGWTTLTFGEYQE 77

  Fly    73 NAMRVASYMRNMGLGQTDIVGVMGRHTTHQSAVAYACFFNGTPL-------------HALHNAYE 124
            ...:.|..:.::|:.:...||::..:........:.....|..:             |.|.....
  Fly    78 RVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVLATGES 142

  Fly   125 EACI-------AKLFGITK--PRL-----------IFCDGD----EYEKVKSAT--KDLQVTIVT 163
            ..|:       |||..|.:  |||           .|.|.:    .::|::..|  .:|:..::.
  Fly   143 SVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLA 207

  Fly   164 MRNHPRGSVRIQDVLTTPVMQNFQPLRLKDGIDHTLAILSSSGTSGFPKAVTISNSHKI------ 222
            ..:..|.                         :....::.:|||.|.||||.:|:.:.:      
  Fly   208 RESRIRA-------------------------NECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSA 247

  Fly   223 -------------IVDYMAINNSNIQYTSSTLDWCSGLSMA--ITSGVFSTTSIIADCDFDPGLF 272
                         .|.|:.:::    ..:...|...|||.|  :|         .||.|...|..
  Fly   248 AAHMQDIQVGKESFVSYLPLSH----VAAQIFDVFLGLSHAGCVT---------FADKDALKGTL 299

  Fly   273 CRAIGKYR---------------------------ISMVLLSSSYLAIFANCPEFESADLSSLNY 310
            .:...|.|                           .|.:||:.:..|:    .|.::..::..:.
  Fly   300 IKTFRKARPTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLARARAAV----AEHQTTLMAGKSP 360

  Fly   311 VIFGGSS--CSLEVQRKVRSRLSHD-------------------------CLNFCYGLTELNSAG 348
            .|:|.:.  .:..|.:.:|..:..|                         .|..|||::|  ::|
  Fly   361 SIYGNAKYWLACRVVKPIREMIGVDNCRVFFTGGAPTSEELKQFFLGLDIALGECYGMSE--TSG 423

  Fly   349 SVNLNFD-EKPNSVGRAIRGIKIKVIDEQGEAQEP--NVVGEICFHNSQKWAGYYKNPDETRQIQ 410
            ::.||.| ....|.|:|..|:.:|:       .||  |..|||.......:.||...||:|.:..
  Fly   424 AITLNVDISNLYSAGQACEGVTLKI-------HEPDCNGQGEILMRGRLVFMGYLGLPDKTEETV 481

  Fly   411 DSENWIHTGDLGYVDKDGYLFVIDRLKDML---KYQNIMYYPSEIENVI-AEMPNVLEACVFGIW 471
            ..:.|:|:|||||:|..|.|.:..|||:::   ..:||.  |..||.:| .|:|     ||..:.
  Fly   482 KEDGWLHSGDLGYIDPKGNLIISGRLKELIITAGGENIP--PVHIEELIKKELP-----CVSNVL 539

  Fly   472 DPVNGDEAAASLV---------KKPGTQLEA--QDVVEYVRK----------------------- 502
              :.||......|         .|.|..|:|  ::.:|::|.                       
  Fly   540 --LIGDHRKYLTVLLSLKTKCDAKTGIPLDALREETIEWLRDLDIHETRLSELLNIPADLQLPND 602

  Fly   503 --------RITAKFKQLNGGALIVDQIVRSGNRKTNRSAV 534
                    .||||.|.|        :.:..|.::.|:.|:
  Fly   603 TAALAATLEITAKPKLL--------EAIEEGIKRANKYAI 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 128/672 (19%)
AFD_class_I 55..530 CDD:302604 120/640 (19%)
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 122/641 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452221
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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