DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and ACSM4

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001073923.1 Gene:ACSM4 / 341392 HGNCID:32016 Length:580 Species:Homo sapiens


Alignment Length:568 Identity:125/568 - (22%)
Similarity:209/568 - (36%) Gaps:131/568 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DKLKIWSGREAPSLFSPNLSIGEIIFGDMVNNPKLIAQISITEDIVLTREDLHMNAMRVASYM-R 82
            |.|..||.:|..              |:...||.|.......:::..:..:|...:.:.|:.: :
Human    57 DVLDQWSQKEKT--------------GERPANPALWWVNGKGDEVKWSFRELGSLSRKAANVLTK 107

  Fly    83 NMGLGQTDIVGVMGRHTTHQSAVAYAC------FFNGT-------PLHALHNAYEEACIAKLFGI 134
            ..||.:.|.:.|:.........|..||      |..||       .|:.|..:..:..:|.    
Human   108 PCGLQRGDRLAVILPRIPEWWLVNVACIRTGIIFMPGTIQLTAKDILYRLRASKAKCIVAS---- 168

  Fly   135 TKPRLIFCDGDEYEKVKSATKDLQVTIVTMRNHPRGSVRIQDVLTTPVMQN----FQPL------ 189
                         |:|..|.:.:.:....::.         .:|.:|...|    ||.|      
Human   169 -------------EEVAPAVESIVLECPDLKT---------KLLVSPQSWNGWLSFQELFQFASE 211

  Fly   190 ---RLKDGIDHTLAILSSSGTSGFPKAVTISNSHKII------VDYMAINNSNIQYTSSTLDWCS 245
               .::.|....:.|..:|||:||||....|.|...|      ..::.:.:|:|.:..|...|..
Human   212 EHSCVETGSQEPMTIYFTSGTTGFPKMAQHSQSSLGIGFTLCGRYWLDLKSSDIIWNMSDTGWVK 276

  Fly   246 GLSMAITSGVFSTTSIIADC-------DFDPGLFCRAIGKYRISMVLLSSSYLAIFANCPEFESA 303
                |....|||:. :...|       .||...|...:..|.|:.:....:...:... .:.:..
Human   277 ----AAIGSVFSSW-LCGACVFVHRMAQFDTDTFLDTLTTYPITTLCSPPTVYRMLVQ-KDLKRY 335

  Fly   304 DLSSLNYVIFGGSSCSLEV--QRKVRSRLSHDCLNFCYGLTELNSAGSVNLNFDEKPNSVGRAIR 366
            ...||.:.:.||...:.||  |.:|::.|.   |...||.||:....:.....:.||.|:|:.:.
Human   336 KFKSLRHCLTGGEPLNPEVLEQWRVQTGLE---LYEGYGQTEVGMICANQKGQEIKPGSMGKGML 397

  Fly   367 GIKIKVIDEQGEAQEPNVVGEI----------CFHNSQKWAGYYKNPDETRQIQDSENWIHTGDL 421
            ...:::|||.|....|...|||          ||     ::.|..||.:|......:.:: |||.
Human   398 PYDVQIIDENGNVLPPGKEGEIALRLKPTRPFCF-----FSKYVDNPQKTAATIRGDFYV-TGDR 456

  Fly   422 GYVDKDGYLFVIDRLKDMLKYQNIMYYPSEIENVIAEMPNVLEACVFGIWDPVNGDEAAASLV-- 484
            |.:|.|||.:.:.|..|::........|.|:|:.:.|.|.|:|:.|....|.:.|:...|.:|  
Human   457 GVMDSDGYFWFVGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDQIRGEVVKAFVVLA 521

  Fly   485 ------KKPGTQLEAQD-------------VVEYVR---KRITAKFKQ 510
                  ......||.||             .||:|:   |.||.|.|:
Human   522 APFKSYNPEKLTLELQDHVKKSTAPYKYPRKVEFVQELPKTITGKIKR 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 120/552 (22%)
AFD_class_I 55..530 CDD:302604 116/532 (22%)
ACSM4NP_001073923.1 MACS_euk 48..577 CDD:213294 125/568 (22%)
Acs 49..580 CDD:223442 125/568 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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