DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and CG12512

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_608924.1 Gene:CG12512 / 33766 FlyBaseID:FBgn0031703 Length:593 Species:Drosophila melanogaster


Alignment Length:562 Identity:127/562 - (22%)
Similarity:228/562 - (40%) Gaps:74/562 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VKQKLLNAMCTYDDKLKIWSGREAPSLFSPNLSIGE--II--------------FGDMVNNPKLI 54
            :.:.:|...|.::....|  ....|||.|....||:  ::              |||:.      
  Fly     8 ISRYMLRQKCAFNSMRSI--STSMPSLISHKHHIGKDPLVYRTIGQQLELSASNFGDVE------ 64

  Fly    55 AQISITEDIVLTREDLHMNAMRVASYMRNMGLGQTDIVGVMGRHTTHQSAVAYACFFNGTPLHAL 119
            |.:|..|....:.:.|...|..:|:..|.:||...|.||:...:..|...........|.....|
  Fly    65 AIVSCHEGKRYSFKSLLQEADALAAGFRKLGLQPGDAVGLWAPNYLHWYLGMMGAARAGLTSVGL 129

  Fly   120 HNAYEEACIAKLFGITKPRLI-----FCDGDEYE---------------KVKSAT-KDLQVTIVT 163
            :.||:...||........:.|     |...:.||               |::|.. ..|:..|:.
  Fly   130 NPAYQGPEIAYCLNKVNVKAIIAPETFKTQNYYEILRDICPEISDADTGKIRSEKFPHLRSVIID 194

  Fly   164 MRNHPRGSVRIQDVL-TTPVMQNFQPLRLKDGI--DHTLAILSSSGTSGFPKAVTISNSHKIIVD 225
            ..:..:|::|..|.| .....:..:..:::..|  :....|..:|||:|.|||..::: |..:.:
  Fly   195 SNDSLKGALRFDDFLDLASKSEREEVAKMQKSILPESACNIQFTSGTTGNPKAACLTH-HNFVNN 258

  Fly   226 YMAINNSNIQYTSSTLDWCSGLSM------------AITSGVFSTTSIIADCDFDPGLFCRAIGK 278
            .:.:.|.| :.....:  |..:.|            |:|.|   .|.::....|.|....:||..
  Fly   259 GIHVGNRN-ELEGERI--CVQVPMFHAFGVIISIMAALTKG---ATMVLPAAGFSPKDSLQAIVN 317

  Fly   279 YRISMVLLSSSYLAIFANCPEFESADLSSLNYVIFGGSSCSLEVQRKVRSRLSHDCLNFCYGLTE 343
            .:.|::..:.:......|..:.....|..:...:.||:..|.::.:.||..|:.:.::..|||||
  Fly   318 EKCSVIHGTPTMYVDLVNTQKKLQVPLGRIKKAVTGGAIVSPQLIKDVRQVLNVEAVHSVYGLTE 382

  Fly   344 LNSAGSVNLNFDEKP---NSVGRAIRGIKIKVIDEQGEAQEPNVVGEICFHNSQKWAGYYKNPDE 405
            ..:....:|..|...   ||||.....|:.||:|.:|........||:|........||:.:.::
  Fly   383 TTAVIFQSLPGDSSDVVLNSVGHLTDHIEAKVVDAEGRCVPFGQPGELCVRGYTTMLGYHDDEEK 447

  Fly   406 TRQIQDSENWIHTGDLGYVDKDGYLFVIDRLKDMLKYQNIMYYPSEIENVIAEMPNVLEACVFGI 470
            |::...::.|:.|||...::.:||..::.|||:||.......:|.|||:.:...|.|:||.|.|:
  Fly   448 TKETIGNDRWLRTGDQFVLEANGYGRIVGRLKEMLIRGGENIFPKEIEDFLNAHPQVIEAHVIGV 512

  Fly   471 WDPVNGDEAAASLVKKPG---TQLEAQDVVEYVRKRITAKFK 509
            .|...|:|..|.:..:.|   ....|:.:..|.:.:: |.||
  Fly   513 PDERLGEEVCAYVRLEEGVDPASFTAETLKAYAKGKL-AHFK 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 120/533 (23%)
AFD_class_I 55..530 CDD:302604 115/497 (23%)
CG12512NP_608924.1 PRK08315 43..592 CDD:236236 118/525 (22%)
FACL_like_2 229..577 CDD:213284 83/333 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.