DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and acsl4b

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001093209.1 Gene:acsl4b / 334561 ZFINID:ZDB-GENE-030131-6493 Length:671 Species:Danio rerio


Alignment Length:636 Identity:129/636 - (20%)
Similarity:229/636 - (36%) Gaps:153/636 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SPNLSIGEIIFGDMVNNP--KLIAQISITEDIVLTREDLHMNAMRVASYMRNMGLGQTDIVGVMG 96
            :|.|...|::..:....|  |:..::.:.....::.|.:........|.:..:|......:.:..
Zfish    53 APCLGTREVLSEEEEKQPNGKIFKKLVLGNYSWMSYEAVDQAVESFGSGLAALGQKPRQTIAIFC 117

  Fly    97 RHTTHQSAVAYACFFNGTPLHALHNAYEEACIAKLFG---------ITKPRLIFCDGDEYEKVKS 152
            .........|.|||....||..|:....|..:|  :|         ||...|:   ..:.:.|..
Zfish   118 ETRAEWMIAAQACFRRNYPLVTLYATLGEDAVA--YGLNQCGATHLITSTELL---QSKLKNVLF 177

  Fly   153 ATKDLQVTI------VTMRNHPRGSV--RIQDVLTTPVM-QNFQPLRLKDGIDHTLAILSSSGTS 208
            |...||..|      |...::|:..:  .:|:|...... :|......:........::.:||::
Zfish   178 AVSGLQHVIYVGSGEVHQADYPQSLIIHSMQEVTELGAKPENLSVEYERPSASDLAVVMYTSGST 242

  Fly   209 GFPKAVTISNSHKI------------------IVDYMAINNSNIQYTSSTLDWCSGLSMAITSGV 255
            |.||.|.:.:|:.|                  ||.|:.:.:. ::.|:.    .|.||.....|.
Zfish   243 GNPKGVKMQHSNLIAGMAGQCQRIPGLGSQDTIVSYLPLAHV-LELTAE----ISCLSHGCRLGY 302

  Fly   256 FSTTSII-----------ADCD-FDPGL----------FCRAI-GKYRISMVLLSSSYLAIF--- 294
            .|..::.           .||. ..|.|          .|:.: ||.:...|:..:.:...|   
Zfish   303 SSPHTLTDQSSKIKKGSKGDCSVLKPTLIAAVPEIMDRICKNVNGKLQEMSVIKRTLFKLGFDYK 367

  Fly   295 -------ANCPEFESADLSSLNY--------VIFGGSSCSLEVQRKVRSRLSHDCLNFC------ 338
                   |:.|..:......:|.        ::.||:..|...||         .:|.|      
Zfish   368 LQQVSKGADSPMCDMLFFKQVNVLLGGCVRRMLSGGAPLSASTQR---------FMNVCFCPIAV 423

  Fly   339 -YGLTELNSAGSVNLNFDEKPNSVGRAIRGIKIKVID--EQG--EAQEPNVVGEICFHNSQKWAG 398
             |||||...||:::.:.|.....||..:...:||:.|  |.|  ...:|:..|||.........|
Zfish   424 GYGLTETCGAGTISDSSDYSTGRVGAPLICSEIKLRDWPEGGYTSQDKPHPRGEILIGGPNVAMG 488

  Fly   399 YYKNPDETRQ-----IQDSENWIHTGDLGYVDKDGYLFVIDRLKDMLKYQNIMYYP-SEIENVIA 457
            ||.:..|.:.     .:..:.|..|||:|.|..||.|.::||.||::|.|...|.. .::|..:.
Zfish   489 YYGSEGEGQNDNFWVDEAGQRWFSTGDIGEVHPDGCLEIVDRKKDLVKLQAGEYVSLGKVEAAMK 553

  Fly   458 EMPNVLEACVFGIWDP-------VNGDEAAASLVKKPG-----------TQLEAQDVVEYVRK-R 503
            ..|.:...||:...|.       |...:....|.||.|           |.:| ::|::.::: .
Zfish   554 NSPLIDNICVYASSDQNYVISFVVPNQKNLTELAKKSGIDGEWDDICNHTMME-EEVLKVIKEIA 617

  Fly   504 ITAKFKQLNGGALIVDQIVRSGNR-------------KTNRSAVKEHFLKN 541
            :|:|.::..     |.|.:|..:.             |..|..:|.|::|:
Zfish   618 VTSKLERFE-----VPQKIRLSSEPWTPETGLVTDAFKLKRKELKNHYMKD 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 128/633 (20%)
AFD_class_I 55..530 CDD:302604 120/600 (20%)
acsl4bNP_001093209.1 PLN02387 26..668 CDD:215217 129/636 (20%)
LC-FACS_euk 81..668 CDD:213293 124/608 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582933
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.