DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and LOC316124

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_006244385.1 Gene:LOC316124 / 316124 RGDID:1595856 Length:705 Species:Rattus norvegicus


Alignment Length:645 Identity:134/645 - (20%)
Similarity:230/645 - (35%) Gaps:206/645 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VLTREDLHMNAMRVASYMRNMGLGQTDIVGVMGRHTTHQSAVAY-ACFFNGTPLHALHNAYEEAC 127
            |||..:.:....|.|.....:||.:...||:||.:::.....:. |....|..:..|.:...:||
  Rat   102 VLTYIEYYEACRRAAKAFLKVGLERFHGVGIMGINSSEWVIASIGAIMAGGISVGILSSNSPKAC 166

  Fly   128 IAKLFGITKPRLIF-CDGD-EYEKVKSATKDLQVTIVTMRNHPRGSVRIQDVLTTPVMQNFQP-- 188
              ::...|....|| .|.| :.:||......|:        |.:..::.::.:     |..||  
  Rat   167 --QIIAETSEMDIFVVDNDRQLQKVNQIQGYLK--------HLKAIIQYREDI-----QEVQPNL 216

  Fly   189 ------LRLKDGI-DHTL-------------AILSSSGTSGFPKAVTISNSH------------- 220
                  |.|.||| |..|             |::.:.||:|.|||:.:|:.:             
  Rat   217 YSWKGFLDLADGISDEKLDQIIDAQKPNQCCALVYNQGTTGNPKAIMLSHDNITWTTAATVQSLG 281

  Fly   221 --------KIIVDYMAINNSNIQYTSSTLDWCSGLSMA-------ITSGVFSTTSIIADCDF--- 267
                    :|:|.|:.:..:.||    .||....:|:|       :.||.:|....::...|   
  Rat   282 YKCPPHGQEILVSYLPLCFAGIQ----ILDVWVAISVAGTVYFPSLESGKWSGLPRVSGTGFLME 342

  Fly   268 -----DPGLFC------------------------RAIGKYRISMVLLSS--------------- 288
                 .|..||                        |.|.::.:.|.|.::               
  Rat   343 LLREVQPTTFCGIPWVWDRMLDSLKTKHLDSTAFRRKIDRWAMRMGLSTNKRQMMGGIHQPLCFG 407

  Fly   289 -----------SYLAIFANCPEFESADL----SSLNYVIFGGSSCSLEVQRKVRSRLSHDCLNFC 338
                       .:|.: .:|.:|.:..:    |:|::.:    |.::.:       |....|:.|
  Rat   408 LAKRLTFKPAKKFLGL-NHCEQFLNVGMGLPRSTLDFFL----SMNIPI-------LELYGLSEC 460

  Fly   339 YGLTELNSAGSVNLNFDEKPNSVGRAIRGIKIKVIDEQGEAQEPNVVGEICFHNSQKWAGYYKNP 403
            .||..|:|..:..:      .|.|:|:.....||     |.:..:.||.:|......:.||.::.
  Rat   461 TGLHTLSSLQAYRI------LSSGKALPKTHTKV-----EKENQDGVGNLCIWGRHVFMGYLRDK 514

  Fly   404 DETRQIQDSENWIHTGDLGYVDKDGYLFVIDRLKDMLKYQN-IMYYPSEI-ENVIAEMPNVLEAC 466
            ..|.:..|:..|:||.|||::|.|.||:|.....|:::..: .|..|..| |.|...:|.|..|.
  Rat   515 HSTERKVDNHGWLHTNDLGFLDFDKYLYVTGNTNDLIRLNSGEMVNPIPIEERVRTRIPLVRYAM 579

  Fly   467 VFG--------------IWDPVNGD-------EAAASLVKKPGTQLEAQDVVEYVRKRITAKF-- 508
            :.|              ..:|..|:       ||.|...|.........||: |.|..:..:|  
  Rat   580 LVGQDAPYLCALLTLKCQINPETGEAQGNLTSEAIACCRKLRSQSTWLSDVL-YNRDPLVTQFID 643

  Fly   509 ---KQLNG-----GALIVDQIVRSGN-----------RKTNRSAV----KEHFLKNYNNN 545
               :.:|.     ||.|:..::...:           .|.|||.|    ||...|.|..:
  Rat   644 QGIQDVNSEAPSVGAKIIKWVILDNDFSVDGGELGPMSKMNRSTVIKIYKEEIQKLYETS 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 132/639 (21%)
AFD_class_I 55..530 CDD:302604 126/624 (20%)
LOC316124XP_006244385.1 FAA1 74..701 CDD:223953 133/641 (21%)
ACSBG_like 95..700 CDD:213299 133/640 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342985
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.