DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18586 and Dip2c

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_038951677.1 Gene:Dip2c / 307067 RGDID:1560155 Length:1626 Species:Rattus norvegicus


Alignment Length:588 Identity:115/588 - (19%)
Similarity:219/588 - (37%) Gaps:149/588 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LTREDLHMNAMRVASYMRNMG-LGQTDIVGVMGRHTTHQSAVAYACFFNG------TPLHALHNA 122
            ||...||..|.::|..:...| |...|.|.::........|..|.|.:.|      .|.|..:.|
  Rat  1062 LTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQNIA 1126

  Fly   123 YEEACIAKLFGITKPRLIFCDGDEYEKVKSATKDLQVTIVTMRNHPRGSVRIQDVLTTPV----- 182
            .....:..:..:::              .:.....|:....:|:  |.:....||.|.|:     
  Rat  1127 TTLPTVKMIVEVSR--------------SACLMTTQLICKLLRS--REAAAAVDVRTWPLILDTD 1175

  Fly   183 -MQNFQPLRL-KDGIDHTLAIL---------------SSSGTSGFPKAVTI------SNSHKIIV 224
             :...:|.:: |.....|||.|               |.:.||.|.:::.:      |....|.:
  Rat  1176 DLPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICL 1240

  Fly   225 D-YMAINNSNIQYTSSTLDWCSGLSMAITSGVFSTTSIIADCDFDPGLFCRAIGKYRISMVLLSS 288
            | |..:         ..:.||   ..::.||..|.....::.:.:|.|:..|:.:|::.....|.
  Rat  1241 DPYCGL---------GFVLWC---LCSVYSGHQSILIPPSELETNPALWLLAVSQYKVRDTFCSY 1293

  Fly   289 SYLAIFANCPEFESADLSSLNYVIFGGSSCSLEVQRKVR-------SRLSHD------------- 333
            |.:.:.......::..|.:....:....:|.:..:.:.|       |:|..|             
  Rat  1294 SVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEERPRIALTQSFSKLFKDLGLHPRAVSTSFG 1358

  Fly   334 C---LNFC------YGLTELNSAG----------------SVNLNFDEKPNSV-----GRAIRGI 368
            |   |..|      :.|.|..::|                .|.|.....|:|:     |:.:.|:
  Rat  1359 CRVNLAICLQPHRLWTLAEQGTSGPDPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGV 1423

  Fly   369 KIKVIDEQGEAQEP---NVVGEICFHNSQKWAGYYK-NPDETRQ---------IQDSEN-WIHTG 419
            :|.:.:.  |.:.|   :.:|||..|::...:||:. ..||:.|         ..|::. |..||
  Rat  1424 RIIIANP--ETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESLQSDHFNSRLSFGDTQTIWARTG 1486

  Fly   420 DLGYV------DKDG----YLFVIDRLKDMLKYQNIMYYPSEIE-NVIAEMPNVLEACVFGIWDP 473
            .||::      |.:|    .|:|:..|.:.::.:.:.|:|.:|| :||....:|.|..|| .|  
  Rat  1487 YLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVF-TW-- 1548

  Fly   474 VNGDEAAASLVKKPGTQLEAQDVVEYVRKRITAKFKQLNGGALIVD-QIVRSGNR-KTNRSAVKE 536
               ......:|:..|::.||.|:|..|...:..:...:.|..::|| .::...:| :..|..:::
  Rat  1549 ---TNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLIVGVVVVVDIGVIPINSRGEKQRMHLRD 1610

  Fly   537 HFL 539
            .||
  Rat  1611 GFL 1613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 115/588 (20%)
AFD_class_I 55..530 CDD:302604 112/577 (19%)
Dip2cXP_038951677.1 DMAP_binding 8..174 CDD:368923
Dip2 392..968 CDD:341231
Dip2 1048..1622 CDD:341231 115/588 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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