DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18586 and Acsm3

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_006230168.1 Gene:Acsm3 / 24763 RGDID:62086 Length:581 Species:Rattus norvegicus


Alignment Length:351 Identity:88/351 - (25%)
Similarity:147/351 - (41%) Gaps:65/351 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 LAILSSSGTSGFPKAVTISNSHKIIVDYMAINN--------SNIQYTSSTLDWCSGLSMAI---- 251
            :||..:|||:|.||  .|.::|......:::|.        |::.:.:|...|......::    
  Rat   224 MAIYFTSGTTGPPK--MIGHTHSSFGLGLSVNGRFWLDLIASDVMWNTSDTGWAKSAWSSVFSPW 286

  Fly   252 TSGV---------FSTTSIIADCD-FDPGLFCRAIGKYRISMVL---LSSSYLAIFANCPEFESA 303
            |.|.         |.:|||:.... |...:||.|...||  |::   ::.||             
  Rat   287 TQGACVFAHYLPRFDSTSILQTLSKFPITVFCSAPTAYR--MLIQNDITRSY------------- 336

  Fly   304 DLSSLNYVIFGGSSCSLEVQRKVRSRLSHDCLNFCYGLTEL-----NSAGSVNLNFDEKPNSVGR 363
            ..:||.:.:..|...:.||..:.:.:...|... .||.||.     |..|     ...||.|:|:
  Rat   337 KFNSLKHCVSAGEPINPEVMEQWKKKTGLDIYE-GYGQTETVLICGNFKG-----MKIKPGSMGK 395

  Fly   364 AIRGIKIKVIDEQGEAQEPNVVGEICFHNSQK-----WAGYYKNPDETRQIQDSENWIHTGDLGY 423
            ......::::||.|....|...|:|.......     :..|..||.:|...... |:..|||.||
  Rat   396 PSPAFNVEILDENGTILPPGQEGDIAVQVLPDRPFGLFTHYVDNPSKTASTLRG-NFYITGDRGY 459

  Fly   424 VDKDGYLFVIDRLKDMLKYQNIMYYPSEIENVIAEMPNVLEACVFGIWDPVNGDEAAASLVKKPG 488
            :|:|||.:.:.|..|::........|.|:|:.:.|.|::.|:.|....||:.|:...|.:|..|.
  Rat   460 MDEDGYFWFVARSDDVILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVVKAFIVLNPD 524

  Fly   489 TQLEAQ-----DVVEYVRKRITAKFK 509
            .:|..|     ::.|:| |:.||.:|
  Rat   525 YKLHDQEQLKKEIQEHV-KKTTAPYK 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 88/351 (25%)
AFD_class_I 55..530 CDD:302604 88/351 (25%)
Acsm3XP_006230168.1 Acs 45..575 CDD:223442 88/351 (25%)
AFD_class_I 48..578 CDD:302604 88/351 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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