DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18586 and Acsm4

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_848501.1 Gene:Acsm4 / 233801 MGIID:2681844 Length:580 Species:Mus musculus


Alignment Length:559 Identity:127/559 - (22%)
Similarity:215/559 - (38%) Gaps:113/559 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DKLKIWSGREAPSLFSPNLSIGEIIFGDMVNNPKLIAQISITEDIVLTREDLHMNAMRVASYM-R 82
            |.|..||.:|..              |:...||.|.......:::..:.::|...:.:.|:.: :
Mouse    57 DVLDQWSLKEKS--------------GERPANPALWWVNGKGDEVKWSFQELGSLSRKAANVLTK 107

  Fly    83 NMGLGQTDIVGVMGRHTTHQSAVAYAC------FFNGT-------PLHALHNAYEEACIAKLFGI 134
            ..||.:.|.|.|:.........:..||      |..||       .|:.| .|.:..||.....:
Mouse   108 PCGLQRGDRVAVILPRIPEWWLINVACMRTGLVFMPGTIQLTRKDILYRL-QASKAKCIVASEEV 171

  Fly   135 TKPRLIFCDGDEYEKVKSATKDLQVTIVTMRNHPRGSVRIQDVLTTPVMQNFQPLRLKDGIDHTL 199
            . |.:        :.:.|....|:..::...:|..|.:..|::|.:...::   ..::.|....:
Mouse   172 A-PAV--------DSIVSECPSLKTKLLVSPHHWDGWLNFQELLQSASEEH---NCVETGSQEPM 224

  Fly   200 AILSSSGTSGFPKAVTISNSHKIIVDYMAINNSNIQYTSSTLDW---CSGLSMAITSGVFST--- 258
            ||..:|||:|.||....|.. .:.:.|.......:..|||.:.|   .:|...|....||||   
Mouse   225 AIYFTSGTTGSPKMAQHSQG-SLGIGYTLCGRYWLDLTSSDIMWNMSDTGWIKAAIGSVFSTWLR 288

  Fly   259 ---TSIIADCDFDPGLFCRAIGKYRISMVLLSSSYLAIFANCPEFESADLSSLNYVIFGGSSCSL 320
               ..:.....||..:|...:..|.|:.:..:.:...:... .:.:......|.:.:.||...:.
Mouse   289 GACVFVHRMAQFDTDIFLDTLTTYPITTLCSAPTVYRMLVQ-KDLKRYQFKRLRHCLTGGEPLNP 352

  Fly   321 EV--QRKVRSRLSHDCLNFCYGLTEL-----NSAGSVNLNFDEKPNSVGRAIRGIKIKVIDEQGE 378
            ||  |.|:::.|.   |...||.||:     |..|..     .||.|:|:.:....:::|||.|.
Mouse   353 EVLEQWKMQTGLE---LYEGYGQTEVGIICANRKGEA-----IKPGSMGKGVVPYDVQIIDENGN 409

  Fly   379 AQEPNVVGEI----------CFHNSQKWAGYYKNPDETRQIQDS---ENWIHTGDLGYVDKDGYL 430
            .......|||          ||     ::.|..||::|    |:   .|:..|||.|.:|.|||.
Mouse   410 ILPSGKEGEIALRLKSDRPFCF-----FSEYVDNPEKT----DATIRRNFYVTGDRGVMDDDGYF 465

  Fly   431 FVIDRLKDMLKYQNIMYYPSEIENVIAEMPNVLEACVFGIWDPVNGDEAAASLV--------KKP 487
            :.:.|..|::........|.|:|:.:.|.|.|:|:.|....||:.|:...|.:|        .:.
Mouse   466 WFVGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKAFIVLAAPYKCSNRE 530

  Fly   488 GTQLEAQD-------------VVEYVR---KRITAKFKQ 510
            ....|.||             .||:|:   |.||.|.|:
Mouse   531 KLTAELQDHVKNSTAPYKYPRKVEFVQELPKTITGKIKR 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 122/543 (22%)
AFD_class_I 55..530 CDD:302604 118/523 (23%)
Acsm4NP_848501.1 MACS_euk 48..577 CDD:213294 127/559 (23%)
Acs 49..576 CDD:223442 127/559 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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