DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and Acsm2

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001171448.1 Gene:Acsm2 / 233799 MGIID:2385289 Length:600 Species:Mus musculus


Alignment Length:550 Identity:131/550 - (23%)
Similarity:206/550 - (37%) Gaps:108/550 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 WSGREAPSLFSPNLSIGEII--------FGDMVNNPKLIAQISITEDIVLTREDLHMNAMRVASY 80
            |..:|||:.|:   ...::|        .|...:.|.|.......::|..:..:|...:.:.|:.
Mouse    60 WGHQEAPAKFN---FASDVIDHWASVEKAGKRSSGPALWWMNGSGKEIKWSFRELSEASKQTANV 121

  Fly    81 MRN-MGLGQTDIVGVMGRHTTHQSAVAYAC------FFNGT-------PLHALHNAYEEACIAKL 131
            :.. .||.:.|.|.|:.........:...|      |..||       .|:.|..:...|.:|  
Mouse   122 LSGACGLHRGDRVAVVLPRIPEWWLMILGCMRTGLVFMPGTIQMRSSDILYRLQASKARAIVA-- 184

  Fly   132 FGITKPRLIFCDGDEY-EKVKSATKD---LQVTIVTMRNHPRGSVRIQDVLTTPVMQNFQPLRLK 192
                        |||. ::|.:...|   |::.::...|...|.:            ||:.|..:
Mouse   185 ------------GDEVAQEVDAVAPDCSFLKIKLLVSENSREGWL------------NFKALLKE 225

  Fly   193 DGIDH---------TLAILSSSGTSGFPKAVTISNSH-----KIIVD---YMAINNSNIQYTSST 240
            ....|         :.||..:|||||.||..  .:||     |..:|   :..::.|:|.:|.|.
Mouse   226 ASTIHQCVETESRESAAIYFTSGTSGPPKMA--EHSHCSLGIKAKMDAASWTGLSTSDIIWTISD 288

  Fly   241 LDWCSGLSMAITSGVFSTTSIIADCDFDPGLFCRAIGKYRISMVL--LSSSYLAIFANCP----E 299
            ..|...:     .|.|....::..|     :|...:.|:....||  |||..:......|    .
Mouse   289 TAWIMNI-----LGAFLEPWVLGAC-----IFVHLLPKFDSQTVLKVLSSYPINTLVGAPIIYRM 343

  Fly   300 FESADLSS-----LNYVIFGGSSCSLEVQRKVRSRLSHDCLNFCYGLTELNSAGSVNLNFDEKPN 359
            ....||||     |:....||.:...|.....:::...: :...||.||......|:.....||.
Mouse   344 LLQQDLSSYKFPHLHSCFSGGETLLPETLENWKAKTGLE-IREIYGQTETGLICRVSRTMKVKPG 407

  Fly   360 SVGRAIRGIKIKVIDEQGEAQEPNVVGEICFHNSQKW-----AGYYKNPDETRQIQDSENWIHTG 419
            .:|.|.....::||||||....|...|:|.......|     :||..||.:|:.....:.|: .|
Mouse   408 YLGTAFAHYDVQVIDEQGNVLPPGKEGDIAIRVKPIWPIGMFSGYVDNPKKTQDNIRGDFWL-MG 471

  Fly   420 DLGYVDKDGYLFVIDRLKDMLKYQNIMYYPSEIENVIAEMPNVLEACVFGIWDPVNGDEAAASLV 484
            |.|..|.:||...|.|..|::........|||:||.:.|.|.|.|..|....||..|:...|.:|
Mouse   472 DRGIKDPEGYFHFIGRSDDIINSSGYRIGPSEVENALMEHPAVSETAVISSPDPSRGEVVKAFVV 536

  Fly   485 KKPGTQLEAQD-----VVEYVRKRITAKFK 509
            ..|......:|     :.|:| |.:||.:|
Mouse   537 LAPEFLSHDRDQLTKVLQEHV-KSVTAPYK 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 125/538 (23%)
AFD_class_I 55..530 CDD:302604 121/510 (24%)
Acsm2NP_001171448.1 Acs 65..591 CDD:223442 128/544 (24%)
AFD_class_I 66..594 CDD:302604 127/543 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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