DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and acs-9

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_510728.2 Gene:acs-9 / 188659 WormBaseID:WBGene00020634 Length:497 Species:Caenorhabditis elegans


Alignment Length:533 Identity:130/533 - (24%)
Similarity:221/533 - (41%) Gaps:88/533 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EIIFGDMV--NNPKL-IAQISITEDIVLTREDLHMNAMRVASYMRNMGLGQTDIVGVMGRHTTHQ 102
            |.:|.|::  |..|. |.|..:.::.|:|.|::.....::...:..:|:.|.|.:.|...::...
 Worm     7 ETLFHDLILENVVKFGIRQALVHDNQVITFEEIPQLVSKLVYKLLELGISQGDTILVCLPNSIWY 71

  Fly   103 SAVAYACFFNGTPLHALHNAYEEACIAKLFGITKPRLIFCDGDEYEKVKSATKDLQVTIVTMRNH 167
            ..:..:|...|..|..:.:......|......:..:|:|.:    ||            |:..|:
 Worm    72 PLLFLSCAKIGAVLSGISHESTAGEIKYSLKQSGAKLVFTN----EK------------VSKENY 120

  Fly   168 PRGSVRIQDVLTTPVM---------QNFQPLRLKDGIDHTLAILSSSGTSGFPKAVTISNSH--- 220
            ...|....:||...|.         ::|:|..|  .||..|....||||:|.||...:::.:   
 Worm   121 WALSENSVEVLPDSVKTYIDRITGHEDFRPENL--DIDSILLAPFSSGTTGAPKCCLLTHRNFLA 183

  Fly   221 ------KIIVDYMAINNSNIQYTSSTLDWCSG---LSMAITSGVFSTTSIIADCDFDPGLFCRAI 276
                  |.:.|.:...:|............||   |.:.:..|  .||.|::  :|.|.:....|
 Worm   184 ATYSLKKFLFDQLLAQSSMKTLAFLPFHHASGFWALLICLLEG--CTTYIMS--EFHPIVMMDLI 244

  Fly   277 GKYRISMVLLSSSYLAIF-------ANCPEFESADLSSLNYVIFGGSSCSLEVQRKVRS---RLS 331
            .||.|..:.:......||       ..||        ||..::.|.|....:..:::.|   :::
 Worm   245 EKYEIDTINIVPPIANIFLKMGILQGRCP--------SLRTILCGSSGLQKDRCKRLLSIFPQVT 301

  Fly   332 HDCLNFCYGLTELNSAGSVNLNFD---EKPNSVGRAIRGIKIKVIDE-QGEAQEPNVVGEICFHN 392
            |....  ||:|||.....|. .||   |...|.|..:.|.:.|:.:. .||.:        .:..
 Worm   302 HFIQG--YGMTELVVLSCVT-PFDDNFEHLGSCGHILPGFETKLFEHPTGETE--------LWLK 355

  Fly   393 SQKWAGYYKN--PDETRQIQDSENWIHTGDLGYVDKDGYLFVIDRLKDMLKYQNIMYYPSEIENV 455
            |......|||  |:     .|.::|:||||: ..:|.|:.:|:||:||::|.......|:|||||
 Worm   356 SDAIMKAYKNGTPN-----LDEDDWLHTGDI-VTEKGGFFYVVDRMKDLIKLNGYQVSPTEIENV 414

  Fly   456 IAEMPNVLEACVFGIWDPVNGDEAAASLV-KKPGTQLEAQDVVEYVRKRITAKFKQLNGGALIVD 519
            |..:|.|.|..|.||.|.:.|....|.:| :|...:|.....:|:..|...:..|||.||..|:.
 Worm   415 ILTLPKVAEVAVVGIEDELCGQLPKAYIVLEKNADELLFLKHLEHTMKEKLSAVKQLRGGVSIIK 479

  Fly   520 QIVRSGNRKTNRS 532
            ::.:|.:.|..::
 Worm   480 EMPKSSSGKIQKN 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 130/533 (24%)
AFD_class_I 55..530 CDD:302604 124/512 (24%)
acs-9NP_510728.2 CaiC 1..494 CDD:223395 130/533 (24%)
Firefly_Luc_like 26..490 CDD:213279 123/510 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.880

Return to query results.
Submit another query.