DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5568 and CMR2

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_014736.1 Gene:CMR2 / 854260 SGDID:S000005619 Length:1648 Species:Saccharomyces cerevisiae


Alignment Length:439 Identity:88/439 - (20%)
Similarity:152/439 - (34%) Gaps:137/439 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 LTTHLTALAYACFFNGTPYHALHTEYEQSAIERLF---GITKPRL-IFCDGDEFEKVQAATKGLQ 158
            |:.||:.|...         ||..||  :.||..:   |..||:| :.|.|.::..         
Yeast   921 LSEHLSKLRKM---------ALQEEY--AMIEPAYRNGGPVKPKLALQCSGVDYRD--------- 965

  Fly   159 VQIVTMRNHP--AGILRIQDILTTPVEMNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISN--- 218
             :.|..|:|.  .....|.:||...:..........|||:..|...|:|..:.:.|.|:.::   
Yeast   966 -ESVDTRSHTKLTDFKSILEILEWRISNYGNETAFSDGTNTNLVNSSASNDNNVHKKVSWASFGK 1029

  Fly   219 -----SHQIIGSFLPV---DSSIIQYNPNTLDWASGITMTI--NAAVFSLTSIIED-CDFDPANL 272
                 ..:|:||.:|:   |..||... |::::.:.|...:  |..|..|.|:.|. .:.|...|
Yeast  1030 IVAGFLKKIVGSKIPLKHGDPIIIMCE-NSVEYVAMIMACLYCNLLVIPLPSVKESVIEEDLKGL 1093

  Fly   273 CGLIEKYRISMVFVSSSQLAMLSN------CPEFYAADLSSVKYFFYGGSNCSLEV---QNKIRS 328
            ..:|:.|::..|||.:...::|::      |.:.|.:.:..:..|....:..:|.|   :|.::.
Yeast  1094 VNIIQSYKVKRVFVDAKLHSLLNDNNVVNKCFKKYKSLIPKITVFSKVKTKNALTVSMFKNVLKQ 1158

  Fly   329 RLS---------NEC---VNFSYTLTE-----LNSPGCLNFNFDEKPNSVGRPVRGIQIKIVNEL 376
            :..         ..|   ||..|.:|.     :.....||.:                 |||.|.
Yeast  1159 KFGAKPGTRIGMTPCVVWVNTEYDVTSNIHVTMTHSSLLNAS-----------------KIVKET 1206

  Fly   377 GEAQGPNVVGEICFNNGQKWPGYYKNPEETKKMQDSENWFHTGDLGYM----------------- 424
            .:.:..:.:..||                          .||..||:|                 
Yeast  1207 LQLRNNSPLFSIC--------------------------SHTSGLGFMFSCLLGIYTGASTCLFS 1245

  Fly   425 ------DEDGYLFIIDRL--KDM-LKYQTIMYYPSEIESVIAEMPNVVE 464
                  |...:|..:..|  ||: ||.:|:........|:|....|..|
Yeast  1246 LTDVLTDPKEFLIGLQNLNVKDLYLKLETLYALLDRASSLIEGFKNKKE 1294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 88/439 (20%)
Firefly_Luc_like 55..530 CDD:213279 88/439 (20%)
CMR2NP_014736.1 DMAP_binding 5..121 CDD:368923
AFD_class_I 179..893 CDD:418409
Dip2 1004..1626 CDD:341231 63/335 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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