DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and 4CL2

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_188761.1 Gene:4CL2 / 821678 AraportID:AT3G21240 Length:556 Species:Arabidopsis thaliana


Alignment Length:539 Identity:128/539 - (23%)
Similarity:243/539 - (45%) Gaps:54/539 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LFSPD-LSIGEIIFQQMERNAMLTAQISVTENTELTWKDIQTNAMKVASYMRKLGLEQGDFVGVI 95
            ::.|: |.:.:.||:.:...|.....|:.......|:.|:...:.|:|:.:..||::|.|.|.::
plant    30 IYIPNHLPLHDYIFENISEFAAKPCLINGPTGEVYTYADVHVTSRKLAAGLHNLGVKQHDVVMIL 94

  Fly    96 GRLTTHLTALAYACFFNGTPYHALHTEYEQSAIERLFGITKPRLIFCDGDEFEKVQAATKGLQ-- 158
            ...:..:.....|..|.|....:.:..:..:.|.:....:..:||.......:|:    |.||  
plant    95 LPNSPEVVLTFLAASFIGAITTSANPFFTPAEISKQAKASAAKLIVTQSRYVDKI----KNLQND 155

  Fly   159 -VQIVTMRNH--PAGILRIQDILTTPVEMNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSH 220
             |.|||..:.  |...||..: ||...|.....:..|...:.::|:..||||:||||.|.:::..
plant   156 GVLIVTTDSDAIPENCLRFSE-LTQSEEPRVDSIPEKISPEDVVALPFSSGTTGLPKGVMLTHKG 219

  Fly   221 QIIGSFLPVDSSIIQYNPNTLDWASGITMTINAA--VFSLTSIIEDCDFDPANLCGL-------- 275
            .:......||..    |||.......:.:.:...  :::|.||:         ||.|        
plant   220 LVTSVAQQVDGE----NPNLYFNRDDVILCVLPMFHIYALNSIM---------LCSLRVGATILI 271

  Fly   276 ------------IEKYRISMVFVSSSQLAMLSNCPEFYAADLSSVKYFFYGGSNCSLEVQNKIRS 328
                        |::.::::..|....:..::..||....|||||:....|.:....|:::.|.:
plant   272 MPKFEITLLLEQIQRCKVTVAMVVPPIVLAIAKSPETEKYDLSSVRMVKSGAAPLGKELEDAISA 336

  Fly   329 RLSNECVNFSYTLTELNSPGCLNFNFDEKP-----NSVGRPVRGIQIKIVN-ELGEAQGPNVVGE 387
            :..|..:...|.:||......::..|.::|     .:.|..||..::||:: :.|::...|..||
plant   337 KFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKILDPDTGDSLPRNKPGE 401

  Fly   388 ICFNNGQKWPGYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMYYPSEI 452
            ||....|...||..:|..|....|.:.|.||||:|::|:|..|||:||||:::||:.....|:|:
plant   402 ICIRGNQIMKGYLNDPLATASTIDKDGWLHTGDVGFIDDDDELFIVDRLKELIKYKGFQVAPAEL 466

  Fly   453 ESVIAEMPNVVEACVFGIWDPVYGDKAAASVVKKQGTQLEAQDVVEYVRKRIPAKFKQLNGGALI 517
            ||::...|.:.:..|..:.:...|:...|.||:.:.:.:...::.::|.|:: ..:|::| ....
plant   467 ESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSNISEDEIKQFVSKQV-VFYKRIN-KVFF 529

  Fly   518 VDHIIQSGNRKANRAATKA 536
            .|.|.::.:.|..|...:|
plant   530 TDSIPKAPSGKILRKDLRA 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 128/536 (24%)
Firefly_Luc_like 55..530 CDD:213279 121/507 (24%)
4CL2NP_188761.1 PLN02246 14..553 CDD:215137 128/539 (24%)
4CL 32..546 CDD:213272 127/533 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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