DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and Acsf2

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001030123.1 Gene:Acsf2 / 619561 RGDID:1562656 Length:615 Species:Rattus norvegicus


Alignment Length:516 Identity:128/516 - (24%)
Similarity:227/516 - (43%) Gaps:51/516 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SIGEIIFQQMERNAMLTAQISVTENTELTWKDIQTNAMKVASYMRKLGLEQGDFVGVIGR----- 97
            ::||.:....:|.....|.:.:.||..|.:..::....:.||.:..:||.:||.:|:.|.     
  Rat    73 TVGECLDATAQRFPNREALVIIHENIRLNFAQLKEEVDRAASGLLSIGLRKGDRLGMWGPNSYAW 137

  Fly    98 -LTTHLTALAYACFFNGTP-YHALHTEY-------------EQSAIERLFGITKPRLIFCDGDEF 147
             |....||.|.....:..| |.|...||             :|...::.:.|.|.   .|  .|.
  Rat   138 VLIQLATAQAGIILVSVNPAYQASELEYVLRKVGCKGIVFPKQFKTQQYYNILKQ---VC--PEL 197

  Fly   148 EKVQ-AATKGLQV----QIVTMRNHPAGILRIQDILTT-PVEMNFRPVRLKDG---TDQLLAILS 203
            ||.| .|.|..::    .::::.....|.|.:.:::.. ..|.|...:|...|   ....:.|..
  Rat   198 EKAQPGALKSERLPDLTTVISVDAPLPGTLLLDEVVAAGGKEQNLAQLRYHQGFLSCYDPINIQF 262

  Fly   204 SSGTSGLPKAVTIS-----NSHQIIGSFLPVDSSIIQ----YNPNTLDWASG-ITMTINAAVFSL 258
            :|||:|.||..|:|     |:..:||..|.:.:...:    ..|..|....| :..|:.:.|...
  Rat   263 TSGTTGNPKGATLSHHNIVNNSNLIGQRLKMPAKTAEELRMVLPCPLYHCLGSVGGTMVSVVHGA 327

  Fly   259 TSIIEDCDFDPANLCGLIEKYRISMVFVSSSQLAMLSNCPEFYAADLSSVKYFFYGGSNCSLEVQ 323
            |.::....|:.......|.:.:.::::.:.:....:.|.|:|.:.|.::::.....||....|:.
  Rat   328 TLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILNQPDFSSYDFTTIRGGVIAGSLAPPELI 392

  Fly   324 NKIRSRLSNECVNFSYTLTELNSP-GCLNF---NFDEKPNSVGRPVRGIQIKIVN-ELGEAQGPN 383
            ..|.|:::.:.:...|..|| ||| ..:||   ..::|..||||.:...:.:||| |.||....|
  Rat   393 RAIISKMNMKELVVVYGTTE-NSPVTFMNFPEDTLEQKAGSVGRIMPHTEAQIVNMETGELTKLN 456

  Fly   384 VVGEICFNNGQKWPGYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMYY 448
            :.||:|........||:..|::|.:....:.|:.|||:..|||.|:..|:.|.|||:.......|
  Rat   457 MPGELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTGDIASMDEQGFCRIVGRSKDMIIRGGENIY 521

  Fly   449 PSEIESVIAEMPNVVEACVFGIWDPVYGDKAAASVVKKQGTQLEAQDVVEYVRKRIPAKFK 509
            |:|:|....:.|.|.||.|.|:.|...|::..|.:..|.|.....:::..:.:.:| :.||
  Rat   522 PAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLKSGETTTEEEIKAFCKGKI-SHFK 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 128/516 (25%)
Firefly_Luc_like 55..530 CDD:213279 125/499 (25%)
Acsf2NP_001030123.1 PRK08315 57..615 CDD:236236 128/516 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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