DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and slc27a2a

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001020470.1 Gene:slc27a2a / 449925 ZFINID:ZDB-GENE-050706-104 Length:614 Species:Danio rerio


Alignment Length:635 Identity:133/635 - (20%)
Similarity:226/635 - (35%) Gaps:169/635 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGELQA---GKSP-FKTRNTFDE-------NLKIWSGGEKRSLFSPDLSIGEIIFQQMERNAMLT 54
            :|.|.|   .:|| |.|.:.|.|       .|.|..|.|:.:....|.....:.....:|:..:.
Zfish    37 LGRLLARFGSRSPCFSTLDRFAEVARKHPDKLFIVFGDERYTYRDADRISNRLANALRDRSGQIV 101

  Fly    55 AQISVTENTEL---TWKDIQTNAMKVASYMRKLGLEQGDFVGVIGRLTTHL--TALAYACFFNGT 114
            |...  .|..:   ||           ..:.|||.       .:..|.|::  .:|.:.|..:|.
Zfish   102 ALFH--GNAPMYVFTW-----------LALAKLGC-------TVALLNTNIRSRSLVHCCECSGA 146

  Fly   115 PYHALHTEYEQSAIERLFGITKPR--LIFCDGDEFEKVQAATKGLQVQIVTMRNH--------PA 169
            .......|...:.:|.|..:.:.:  ::...|      :|.|.|    |:.:.|.        |.
Zfish   147 KTLITAAELVPAVLEVLPSLRQQQVSVLMLSG------EAETHG----IINLTNQVSCASEEAPP 201

  Fly   170 GILRIQDILTTPVEMNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQIIGSFLP----VD 230
            ..||....:.:|.                 ..:.:|||:|||||..:::....:.|||.    |.
Zfish   202 ISLRQHITMKSPA-----------------LYIYTSGTTGLPKAAVVTHEKVWMMSFLQRLSGVC 249

  Fly   231 SSIIQYNPNTLDWASGITMTINAAV-----------FSLTSIIEDCDFDPANLCGLIEKYRISMV 284
            ||.|.|....|..::|....::.|:           ||.:...:||           .::.::::
Zfish   250 SSDIIYICLPLYHSAGFLAGLSGAIERGITVVLKSKFSASRFWDDC-----------REHNVTVI 303

  Fly   285 FVSSSQLAMLSNCPEFYAADLSSVKYFFYGGSNCSLEVQNKIRSRLSNECVNFSYTLTELNSPGC 349
            ......:..|.|.||.......||:...  |:....|...:...|..:..|...|..||.|..  
Zfish   304 QYIGEVMRYLCNTPERENDRQHSVRLAL--GNGIRAETWREFLRRFGDVRVCECYGATEGNIG-- 364

  Fly   350 LNFNFDEKPNSVGR----------------------PVRGIQIKIVNELGEAQGPNVVGEICFNN 392
             .||:..|..|:||                      ||||.....| |....:...:|.:|  :.
Zfish   365 -FFNYTGKIGSIGRVSAIHKLLFPYAFLKFDPEKEEPVRGSDGLCV-EAAPGETGLLVAKI--HK 425

  Fly   393 GQKWPGYYKNPEETKK------MQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMYYPSE 451
            ...:.||.||..:|:|      .|..:.:|:||||...|..|:||..||:.|..:::......:|
Zfish   426 LAPFEGYAKNSTQTEKKRLRDVFQRGDMYFNTGDLILADRQGFLFFQDRIGDTFRWKGENVATTE 490

  Fly   452 IESVIAEMPNVVEACVFGIWDPVY-GDKAAASVVKKQGTQLEAQDVVEYVRKRIPA--------- 506
            :..::..:..:..|.|:|:..|.: |....|::....|.:.:.....|:::..:||         
Zfish   491 VSEILLMLDFIEAANVYGVTVPGHEGRVGMAALQLTDGMEFDGSAAYEHMKNLLPAYARPRFIRI 555

  Fly   507 --------KFKQLNGGALIVDHIIQSG---NRKANRAATKAEFLRIMEKN 545
                    .|||      :...::|.|   |...:|       |.|||:|
Zfish   556 QEELRLTGTFKQ------VKVQLVQEGFDPNSTRDR-------LFIMEEN 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 115/583 (20%)
Firefly_Luc_like 55..530 CDD:213279 112/553 (20%)
slc27a2aNP_001020470.1 PRK08279 20..614 CDD:236217 133/635 (21%)
AFD_class_I 74..604 CDD:302604 121/598 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583170
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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