DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and CG3961

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster


Alignment Length:636 Identity:124/636 - (19%)
Similarity:219/636 - (34%) Gaps:168/636 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 FQQMERNAMLTAQISVTENTE------------------LTWKDIQTNAMKVASY---------- 80
            |.:..:|....:.|  |||..                  |.|::..|:..:..:|          
  Fly    84 FYKESKNGKFVSYI--TENVRTLYQTFREGAYASNNGPCLGWRETLTSPYQWINYDEALLRAKNF 146

  Fly    81 ---MRKLGLEQGDFVGVIGRLTTHLTALAYACFFNGTPYHALHTEYEQSAIERLFGITKPRLIFC 142
               |..||......:|:..:...........|:........|:......|...:...|..:::..
  Fly   147 GAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQTDMQVVIV 211

  Fly   143 DGDE-----FEKV-------------------QAATKGLQV-------QIVTMRNHPAGILRIQD 176
            :.|.     .||.                   :|.::|:|:       ::....|||        
  Fly   212 EDDGKAAMLLEKAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNHP-------- 268

  Fly   177 ILTTPVEMNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQIIG----------------- 224
                         .:....:.|..:..:|||:|.||.|.:::.:.:.|                 
  Fly   269 -------------EVPPTAEDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCSVILQMGDHRIRAGD 320

  Fly   225 ---SFLPVDSSIIQYNPNTLDWASG------------------ITMTINAAVFSLTSIIEDCDFD 268
               ||||:.....:...|.:.:..|                  :..|:..||..|.:.:.|...:
  Fly   321 VMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMPAVPRLLNRVYDKIQN 385

  Fly   269 PANLCGLIEKYRISMVFVSSSQ-----LAMLSNC------PEFYAADLSSVKYFFYGGSNCSLEV 322
            ..:..|| ::...:|...:..:     :...:.|      .:.:.|...:::....|.:..:..|
  Fly   386 DISASGL-KRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGNLRLMVVGSAPLAGNV 449

  Fly   323 QNKIRSRLSNEC-VNFSYTLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKIVN--ELGEAQGPNV 384
            ...:|..|.  | |...|..||......|....|..||.||.||....:|:|:  |:......| 
  Fly   450 LTFMRCALG--CLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKLVDVPEMEYFANQN- 511

  Fly   385 VGEICFNNGQKWPGYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMY-Y 448
            .||:|......:.||||:||:|.:..|||.|.||||:|....:|.|.||||.|.:.|.....| .
  Fly   512 TGEVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIV 576

  Fly   449 PSEIESV--IAEMPNVV-------EACVFGI----------WDPVYGDKAAASVV--KKQGTQLE 492
            |.:||::  :::..|.|       ::|:..:          |......:...||:  .|...:|.
  Fly   577 PEKIENIYTLSQYVNQVYVYGESLKSCIIAVVVPDTDVLKQWATENNVRGTLSVLCNNKNVKELI 641

  Fly   493 AQDVVEYVRKRIPAKFKQLNGGALIVDHI-IQSG----NRKANRAATKAEF 538
            ..|::.:.::.....|:|:....|..|.. :|:|    ..||.|...|:.|
  Fly   642 MNDMLNWGKQSGLKSFEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYF 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 124/636 (19%)
Firefly_Luc_like 55..530 CDD:213279 118/615 (19%)
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 115/588 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452242
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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