DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and Acsm5

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001014184.3 Gene:Acsm5 / 361637 RGDID:1309578 Length:578 Species:Rattus norvegicus


Alignment Length:553 Identity:126/553 - (22%)
Similarity:218/553 - (39%) Gaps:93/553 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQAGKSPFKTRNTFDEN-LKIWSGGEKRSLFSPDLSIGEIIFQQMERNAMLTAQISVTENTELTW 67
            :..||.|......|..: |.:||..||.....|:.:...:       |.         ..||:.|
  Rat    41 ISLGKRPVPEYFNFAHDVLDVWSQLEKTGHRPPNPAFWWV-------NG---------SGTEVKW 89

  Fly    68 --KDIQTNAMKVASYMR-KLGLEQGD-FVGVIGRLTTHLTALAYACFFNGTPYHALHTEYEQSAI 128
              :::...:.|.|:.:. ..||:.|| .:.|:.||......:. ||...|.......::..|..:
  Rat    90 TFEELGKQSRKAANILEGACGLKPGDRLMLVLPRLPEWWLTIV-ACMRTGVVMIPGISQLTQKDL 153

  Fly   129 E-RLFGITKPRLIFCD--GDEFEKVQAATKGLQVQIVTMRNHPAGILRIQDIL--TTPVEMNFRP 188
            : ||.......:|..|  ....:.:.|....||.:::.......|.:..:::|  .:| |.|...
  Rat   154 KYRLQAARVKSIITSDALAPHVDAISADCPSLQSRLLVSDTSRPGWINFRELLRVASP-EHNCLR 217

  Fly   189 VRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQIIG------SFLPVDSSIIQYNPNTLD----- 242
            .|..|.    :||..:|||:|.||.|..|.....:|      ..:.:..|.|.:  ||.|     
  Rat   218 TRSGDS----MAIYFTSGTTGTPKMVEHSQCSYGLGFVASGRRLMALTESDIFW--NTTDTGWVK 276

  Fly   243 --------WASGITMTIN--AAVFSLTSIIEDCDFDPANLCGLIEKYRISMVFVSSSQLAMLSNC 297
                    ||:|..:.::  ..|.:.|.:...|.|....:|.:...:|:   .|..........|
  Rat   277 AAWTLFSAWANGACVFVHELPQVDAQTILNTLCRFPITTICCVPTLFRL---LVQEDLTRYKFQC 338

  Fly   298 PEFYAADLSSVKYFFYGGSNCSLEVQNKIRSRLSNECVNFSYTLTELNSPGCLNFNFDE-KPNSV 361
                      :::...||...:.:|::|.:::...| ::..|..:| ....|.||.... |..|:
  Rat   339 ----------LRHCLAGGEALNSDVRDKWKNQTGLE-IHEGYGQSE-TVLICGNFRGSTIKSGSM 391

  Fly   362 GRPVRGIQIKIVNELGEAQGPNVVGEI----------CFNNGQKWPGYYKNPEETKKMQDSENWF 416
            |:......::||:|.|....|...|.|          |..|     .|..|||:|...:..: ::
  Rat   392 GKASPPYDVQIVDEEGNVLPPGKEGNIAIRIKPTRPFCLFN-----CYLDNPEKTAASEQGD-FY 450

  Fly   417 HTGDLGYMDEDGYLFIIDRLKDMLKYQTIMYYPSEIESVIAEMPNVVEACVFGIWDPVYGDKAAA 481
            .|||..:||||||.:.:.|..|::...:....|.|:||.:||.|.|:|:.|....||:.|:...|
  Rat   451 ITGDRAHMDEDGYFWFVGRNDDVINSSSYRIGPVEVESALAEHPAVLESAVVSSPDPIRGEVVKA 515

  Fly   482 SVV-----KKQGTQLEAQDVVEYVRKRIPAKFK 509
            .:|     .....:...:::.|:| |.:.|.:|
  Rat   516 FIVLSPAYVSHDPEALTRELQEHV-KTVTAPYK 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 117/521 (22%)
Firefly_Luc_like 55..530 CDD:213279 115/501 (23%)
Acsm5NP_001014184.3 AFD_class_I 48..576 CDD:418409 123/546 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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