DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5568 and dip-2

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001293298.1 Gene:dip-2 / 3565539 WormBaseID:WBGene00017885 Length:1681 Species:Caenorhabditis elegans


Alignment Length:604 Identity:119/604 - (19%)
Similarity:214/604 - (35%) Gaps:172/604 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 AMLTAQISVTENTELTWKDIQTNAMKVASYM-------------RKLGLEQGDFVGVIGRLT--T 100
            ||:..| |...:|:||:..:.:.|.||| ||             :.:..:.||.|.:|...|  .
 Worm   428 AMVLDQ-SAKPSTQLTYGKLHSRAGKVA-YMLLTKTVQVNKDGSKNVMCKPGDRVALIYPNTQPL 490

  Fly   101 HLTALAYACFFNGTPYHALHTEYEQSAIERLFGITKPRLIFCDGDEFEKV----QAATKGL---- 157
            |..|..|.|...|    .:....|..:.:|..||.  :|.|..|:...||    ::..|||    
 Worm   491 HFLAAFYGCLQAG----VIPVPVEMPSSKREAGIA--QLGFLLGNCGVKVALTSESCYKGLPKKV 549

  Fly   158 ------------------QVQIVTMRNHPAGILRIQDILTTPVEMNFRPVRLKDGTDQLLAILSS 204
                              ..:||..|..|.....:.:.::.|......|.||.|.|  :..|..:
 Worm   550 NTSSTFSAPSGSNSLTGTSSEIVDFRGWPRLWWAVTEHMSKPSRDWTAPPRLADET--IAYIEYT 612

  Fly   205 SGTSGLPKAVTISNSHQIIGSFLPVDSSIIQYNPN-----TLDWAS--GITMTINAAVFSLTSII 262
            :|..|..|...:  :.|.:.:.....::.::|..:     .:|:..  |:...|.|::|:...:|
 Worm   613 TGNDGTVKGCCV--TRQAVFAHCRALTTAMEYKEDETMVCVVDFKREVGLWHAILASIFNGMKVI 675

  Fly   263 ----EDCDFDPANLCGLIEKYRISMVFVSSSQLA-----------------------------ML 294
                .....:||....::.||:.:...|.|..|.                             .|
 Worm   676 FVPYSLMKMNPATWMHMVSKYQATTALVKSRDLHWALLATRDHKDISLASLRTLLVADGANPWSL 740

  Fly   295 SNCPEFYAADLSSVKYFFYGGSNC---------SLEVQNKIRSRLSNE-------------C--- 334
            |:|..|.||...| .|.....:.|         ::.::.:..::|.::             |   
 Worm   741 SSCDAFAAAFTPS-PYSLRPDAMCPCAGSSETGTISIRRRGNAQLGSQSGRGILSMSALSHCVVR 804

  Fly   335 VNFSYTLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKIV-----NELGEAQGPNVVGEICFN--- 391
            |:...:||.|..            ...|:.|.|..:.:.     |.|.:|   :.:||||.:   
 Worm   805 VDTENSLTSLTL------------QDAGQIVAGAVVVVTAIDGSNRLCQA---DEIGEICVSANS 854

  Fly   392 --------NGQKWPGYYKNP-EETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMY 447
                    :||....:...| .|..|:..:..:..:|.:|:|..||.:|::.|.:.:|.... .|
 Worm   855 TAQLYWALDGQTHHTFKVEPVGEYGKLIGAVRYVRSGLIGFMGPDGMVFVVARRQSLLAVSG-RY 918

  Fly   448 YPSE--IESVIAEMPNVV----EACVFGIWDPVYGDKAAASVVKKQGTQLEAQDVVEYVRKRIPA 506
            :.::  |.:|:|..|...    ..|||.  ..|..|:... :|.:|......::..:::.:.:.|
 Worm   919 HSADDIIATVLAVEPMKFVYRGRICVFS--TSVLRDERIV-IVAEQKPNCSEEEAFDWITRVLRA 980

  Fly   507 KFKQLNGGALIVDHIIQSG 525
                       :|.|.|.|
 Worm   981 -----------IDTIHQVG 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 119/604 (20%)
Firefly_Luc_like 55..530 CDD:213279 117/600 (20%)
dip-2NP_001293298.1 DMAP_binding 4..114 CDD:368923
Dip2 427..1027 CDD:341231 119/604 (20%)
Dip2 1096..1677 CDD:341231
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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