DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and hll

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster


Alignment Length:656 Identity:133/656 - (20%)
Similarity:227/656 - (34%) Gaps:196/656 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EKRSLFS---PDLSIGEIIFQQMERNAMLTAQISVTEN------TELTWKDIQTNAMKVASYMRK 83
            ::.|.||   |..:|.|...:..|:.:.|.|.:..|..      |.||:.:.|....:.|..:..
  Fly    24 DEPSSFSQTVPPQTIPEFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQERVEQAALMLLS 88

  Fly    84 LGLEQGDFVGVIGRLTTHLTALAYAC---FF-------NGTPYHALHTEYEQSAIERLFGITKPR 138
            :|:|:...||:          ||:.|   ||       .|.....::......|:..:....:..
  Fly    89 VGVEERSSVGI----------LAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVLATGESS 143

  Fly   139 L-IFCDGDEFEKVQAATKGLQ-----VQI----VTMRNHPAGILRIQDILTTPV------EMNFR 187
            : :..|..:..|::|..:.|.     :|:    ....:|..|....|.:.....      |:..|
  Fly   144 VCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLAR 208

  Fly   188 PVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQI--------------IGSFLPVDSSIIQYNP 238
            ..|::  .::...::.:|||.|:||||.:|:.:.:              :|.     .|.:.|.|
  Fly   209 ESRIR--ANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQVGK-----ESFVSYLP 266

  Fly   239 NTLDWASGITMTINAAVF------SLTSIIEDCDFD--------------PANLCG---LIEKYR 280
                     ...:.|.:|      |....:...|.|              |..:.|   :.||.:
  Fly   267 ---------LSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKLQ 322

  Fly   281 ISMVFVSS-----SQL---------------AMLSNCPEFYA-----------------ADLSSV 308
            ..:|...:     |:|               .|....|..|.                 ..:.:.
  Fly   323 ERLVAAEAKARPYSRLLLARARAAVAEHQTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNC 387

  Fly   309 KYFFYGGSNCSLEVQNKIRSR--LSNECVNFSYTLTELNSPGCLNFNFD-EKPNSVGRPVRGIQI 370
            :.||.||:..|.|::......  ...||...|.|      .|.:..|.| ....|.|:...|:.:
  Fly   388 RVFFTGGAPTSEELKQFFLGLDIALGECYGMSET------SGAITLNVDISNLYSAGQACEGVTL 446

  Fly   371 KIVNELGEAQGPNVVGEICFNNGQKWPGYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDR 435
            ||     .....|..|||.......:.||...|::|::....:.|.|:|||||:|..|.|.|..|
  Fly   447 KI-----HEPDCNGQGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGR 506

  Fly   436 LKDML---KYQTIMYYPSEIESVI-AEMPNVVEACVFGIWDPVYGDKAAASVV---------KKQ 487
            ||:::   ..:.|.  |..||.:| .|:|     ||..:.  :.||......|         .|.
  Fly   507 LKELIITAGGENIP--PVHIEELIKKELP-----CVSNVL--LIGDHRKYLTVLLSLKTKCDAKT 562

  Fly   488 GTQLEA--QDVVEYVRK------------RIPAKFKQLNGGALIVDHI-----------IQSGNR 527
            |..|:|  ::.:|::|.            .|||..:..|..|.:...:           |:.|.:
  Fly   563 GIPLDALREETIEWLRDLDIHETRLSELLNIPADLQLPNDTAALAATLEITAKPKLLEAIEEGIK 627

  Fly   528 KANRAA 533
            :||:.|
  Fly   628 RANKYA 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 130/646 (20%)
Firefly_Luc_like 55..530 CDD:213279 122/621 (20%)
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 123/618 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452218
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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