DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and pdgy

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster


Alignment Length:559 Identity:133/559 - (23%)
Similarity:234/559 - (41%) Gaps:69/559 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GGEKRSLFS----PDLSIGEIIFQQMERNAMLTAQISVTENTELTWKDIQ-TNAMKVASYMRKLG 85
            |..|.|.|.    |::.:.|.:::..::....||.:.|..:.:.|:..:: .:|........|..
  Fly    60 GYYKTSPFDPVTIPNVPLHEYVWRDFKKWERRTAAVCVITDRQYTFAQMRDASAAFAVRLQTKFN 124

  Fly    86 LEQGDFVGV------------IGRLTTHLTALAYACFFNGTPYHALHTEYEQSAIERLFGITKPR 138
            |::.|.:.:            :|.:...||.         |..:.::|..|   |.|....:..:
  Fly   125 LQKPDVLAICLPNLPEYPIATLGAIEAGLTV---------TTVNPVYTPDE---IARQLTFSGAK 177

  Fly   139 LIFCDGDEFEKVQAATK--GLQVQIVTMRNH-----PAGILRIQDILTTPVEMNFRPVRLKD--- 193
            .:......|..:..|:|  |.|:.|..:|..     |.|.:...::.:|      :.||.:|   
  Fly   178 FLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEEALPEGAIDFSELTST------QNVRYEDLKA 236

  Fly   194 ----GTDQLLAILSSSGTSGLPKAVTI------SNSHQIIGSFLPVDSSIIQYNPNTLDWASGIT 248
                ..|.::.:..||||:||||.|.:      ||..|:..| ||:|   :....|||.......
  Fly   237 PKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQAS-LPLD---LMGPQNTLPGVLPFF 297

  Fly   249 MTINAAVFSLTSIIEDCD------FDPANLCGLIEKYRISMVFVSSSQLAMLSNCPEFYAADLSS 307
            ......|..|:.:.:.|.      |.|.:....::||:.|::.:.......:.|.|:........
  Fly   298 HIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQETAPH 362

  Fly   308 VKYFFYGGSNCSLEVQNKIRSRLSNECVNFSYTLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKI 372
            :|....|.:........:..::..|......|.:||.:....|....::...|.|......:.||
  Fly   363 LKVVMSGAAPIGQHDVERFLNKFPNTVFKQGYGMTEASPVVLLTPEGNKVYASTGVLPASTEAKI 427

  Fly   373 VNELG---EAQGPNVVGEICFNNGQKWPGYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIID 434
            |...|   :..||...||:|....|...||..|.|..:......||..:||:.:.||||..:|.|
  Fly   428 VPLDGSDAKGVGPRTTGELCVRGPQVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITD 492

  Fly   435 RLKDMLKYQTIMYYPSEIESVIAEMPNVVEACVFGIWDPVYGDKAAASVVKKQGTQLEAQDVVEY 499
            |:|:::|.:.....|:|:|:|:.:.|.::||.||||.....|:...|.||.:||.:..|:::..|
  Fly   493 RMKELIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEEISAY 557

  Fly   500 VRKRIPAKFKQLNGGALIVDHIIQSGNRKANRAATKAEF 538
            |.:|: |.:|:|.||.:.||.:.::...|..|...|.:|
  Fly   558 VAERV-AHYKKLEGGVIFVDEVPKNPTGKILRRELKEKF 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 129/546 (24%)
Firefly_Luc_like 55..530 CDD:213279 123/516 (24%)
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 127/540 (24%)
Firefly_Luc_like 99..587 CDD:213279 121/510 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452139
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.