DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and LOC316124

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_006244385.1 Gene:LOC316124 / 316124 RGDID:1595856 Length:705 Species:Rattus norvegicus


Alignment Length:684 Identity:122/684 - (17%)
Similarity:236/684 - (34%) Gaps:234/684 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELQAGKSPFKTRNTFDENLKIWSGGEKRSLFSPDLSIGEIIFQQMERNAMLTAQISVTENTELTW 67
            :|:.||:|.       ||             .|.:::.::|   |......:..:::....:.:|
  Rat    59 QLRMGKNPL-------EN-------------EPPVTVPDLI---MSAATKYSHYLAIGSKYKKSW 100

  Fly    68 K-----DIQTNAMKVASYMRKLGLEQGDFVGVIGRLTTHLTALAYACFFNGTPYHALHTEYEQSA 127
            :     :......:.|....|:|||:...||::|..::.....:......|.....:.:.....|
  Rat   101 QVLTYIEYYEACRRAAKAFLKVGLERFHGVGIMGINSSEWVIASIGAIMAGGISVGILSSNSPKA 165

  Fly   128 IERLFGITKPRLIFCDGD-EFEKVQAATKGLQVQIVTMRNHPAGILRIQDILTTPVEMNFRP--- 188
            .:.:...::..:...|.| :.:||.        ||.....|...|::.::.: ..|:.|...   
  Rat   166 CQIIAETSEMDIFVVDNDRQLQKVN--------QIQGYLKHLKAIIQYREDI-QEVQPNLYSWKG 221

  Fly   189 -VRLKDG-----TDQLL---------AILSSSGTSGLPKAVTISNSH------------------ 220
             :.|.||     .||::         |::.:.||:|.|||:.:|:.:                  
  Rat   222 FLDLADGISDEKLDQIIDAQKPNQCCALVYNQGTTGNPKAIMLSHDNITWTTAATVQSLGYKCPP 286

  Fly   221 ---QIIGSFLPVDSSIIQYNPNTLD-WASGITMTINAAVF---------------SLTSIIEDC- 265
               :|:.|:||:..:.||    .|| |   :.:::...|:               |.|..:.:. 
  Rat   287 HGQEILVSYLPLCFAGIQ----ILDVW---VAISVAGTVYFPSLESGKWSGLPRVSGTGFLMELL 344

  Fly   266 -DFDPANLCGL------------------------IEKYRISM---------------------- 283
             :..|...||:                        |:::.:.|                      
  Rat   345 REVQPTTFCGIPWVWDRMLDSLKTKHLDSTAFRRKIDRWAMRMGLSTNKRQMMGGIHQPLCFGLA 409

  Fly   284 ---VFVSSSQLAMLSNCPEFYAADL----SSVKYF---------FYGGSNCSLEVQNKIRSRLSN 332
               .|..:.:...|::|.:|....:    |::.:|         .||.|.|:             
  Rat   410 KRLTFKPAKKFLGLNHCEQFLNVGMGLPRSTLDFFLSMNIPILELYGLSECT------------- 461

  Fly   333 ECVNFSYTLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKIVNELGEAQGPNVVGEICFNNGQKWP 397
                ..:||:.|.:...|         |.|:.:.....|:     |.:..:.||.:|......:.
  Rat   462 ----GLHTLSSLQAYRIL---------SSGKALPKTHTKV-----EKENQDGVGNLCIWGRHVFM 508

  Fly   398 GYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQT-IMYYPSEIES-VIAEMP 460
            ||.::...|::..|:..|.||.|||::|.|.||::.....|:::..: .|..|..||. |...:|
  Rat   509 GYLRDKHSTERKVDNHGWLHTNDLGFLDFDKYLYVTGNTNDLIRLNSGEMVNPIPIEERVRTRIP 573

  Fly   461 NVVEACVFGIWDPVY-------------------GDKAAASV-----VKKQGTQLEAQDVVEYVR 501
            .|..|.:.| .|..|                   |:..:.::     ::.|.|.|  .||: |.|
  Rat   574 LVRYAMLVG-QDAPYLCALLTLKCQINPETGEAQGNLTSEAIACCRKLRSQSTWL--SDVL-YNR 634

  Fly   502 KRIPAKFKQLNGGALIVDHIIQSGNRKANRAATK 535
            ..:..:|         :|..||..|.:|.....|
  Rat   635 DPLVTQF---------IDQGIQDVNSEAPSVGAK 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 116/652 (18%)
Firefly_Luc_like 55..530 CDD:213279 111/625 (18%)
LOC316124XP_006244385.1 FAA1 74..701 CDD:223953 115/649 (18%)
ACSBG_like 95..700 CDD:213299 113/625 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342982
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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