DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5568 and Dip2c

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_038951677.1 Gene:Dip2c / 307067 RGDID:1560155 Length:1626 Species:Rattus norvegicus


Alignment Length:653 Identity:124/653 - (18%)
Similarity:224/653 - (34%) Gaps:208/653 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGELQAGKSPFKTRNTF---DENLKIWSGGEKRSLFSPDLSIGEIIFQQMERNAMLTAQISVTEN 62
            :|:::......|.|..|   .|.|: |     |:..:||    .:::      .:|..:.::..:
  Rat  1013 LGQIEDNDQARKVRTEFLFLSEVLQ-W-----RAQTTPD----HLLY------TLLNCRGTIANS 1061

  Fly    63 TELTWKDIQTNAMKVASYMRKLG-LEQGDFVGVIGRLTTHLTALAYACFFNG------TPYHALH 120
              ||...:...|.|:|..:.:.| |:.||.|.::......|.|..|.|.:.|      .|.|..:
  Rat  1062 --LTCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPHPQN 1124

  Fly   121 TEYEQSAIERLFGITKPRLIFCDGDEFEKVQAATKGLQVQIVTMRNHPAGILRIQDILTTPVEMN 185
            .......::.:..:::...:.            |..|..:::..|...|.:    |:.|.|:.::
  Rat  1125 IATTLPTVKMIVEVSRSACLM------------TTQLICKLLRSREAAAAV----DVRTWPLILD 1173

  Fly   186 FRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQIIGSFLPVDSSIIQYNPNTLDWASGITMT 250
                                 |..|||    ....||.....|...:.:.::.:|....:|:.|:
  Rat  1174 ---------------------TDDLPK----KRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMS 1213

  Fly   251 INAAVFSLTSIIEDCDFDPAN--------LCGL-------------------------------- 275
            ..|......||...|:..|:.        .|||                                
  Rat  1214 HAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSILIPPSELETNPALWL 1278

  Fly   276 --IEKYRISMVFVSSSQLAM----LSNCPEFYAA---DLSSVKYFFYGGSNCSLEVQNKIRSRLS 331
              :.:|::...|.|.|.:.:    |.:..|...|   |||.|:       .|.:..:.:.|..|:
  Rat  1279 LAVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVR-------TCVVVAEERPRIALT 1336

  Fly   332 NE--------------------C-VNFS--------YTLTELNSPG---------CLNFNFDE-- 356
            ..                    | ||.:        :||.|..:.|         ......|.  
  Rat  1337 QSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQPHRLWTLAEQGTSGPDPTTVYVDMRALRHDRVR 1401

  Fly   357 -----KPNSV-----GRPVRGIQIKIVNELGEAQGP---NVVGEICFNNGQKWPGYYKNPEETKK 408
                 .|:|:     |:.:.|::|.|.|.  |.:||   :.:|||..::.....||:....:...
  Rat  1402 LVERGSPHSLPLMESGKILPGVRIIIANP--ETKGPLGDSHLGEIWVHSAHNASGYFTIYGDESL 1464

  Fly   409 MQDSEN-----------WFHTGDLGYM------DEDG----YLFIIDRLKDMLKYQTIMYYPSEI 452
            ..|..|           |..||.||::      |.:|    .|:::..|.:.::.:.:.|:|.:|
  Rat  1465 QSDHFNSRLSFGDTQTIWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYHPIDI 1529

  Fly   453 E-SVIAEMPNVVEACVFGIWDPVYGDKAAASVVKKQGTQLEAQDVVEYVRKRIPAKFKQLNGGAL 516
            | |||....:|.|..|| .|     ......||:..|::.||.|:|..|...:..:...:.|..:
  Rat  1530 ETSVIRAHKSVTECAVF-TW-----TNLLVVVVELDGSEQEALDLVPLVTNVVLEEHYLIVGVVV 1588

  Fly   517 IVD 519
            :||
  Rat  1589 VVD 1591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 116/616 (19%)
Firefly_Luc_like 55..530 CDD:213279 113/596 (19%)
Dip2cXP_038951677.1 DMAP_binding 8..174 CDD:368923
Dip2 392..968 CDD:341231
Dip2 1048..1622 CDD:341231 114/608 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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