DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and Acsl1

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus


Alignment Length:591 Identity:124/591 - (20%)
Similarity:216/591 - (36%) Gaps:143/591 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LTWKDIQTNAMKVASYMRKLGLE--QGDFVGVIGRLTTHLTALAYACFFNGTPYHALHTEYEQSA 127
            :::|.:...|..:.|.:.:.|.:  ...|:|:..:.......:...||........|:......|
  Rat   122 ISYKQVAEMAECIGSALIQKGFKPCSEQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDA 186

  Fly   128 IERLFGITKPRLIFCDGDEFEKVQAATKGLQVQ-------IVTMRNHP--------------AGI 171
            |..:  :.|..|.....|:.||.:...:|::.:       ||.|.::.              .|:
  Rat   187 ITYI--VNKAELSVIFADKPEKAKLLLEGVENKLTPCLKIIVIMDSYDNDLVERGQKCGVEIIGL 249

  Fly   172 LRIQDI----LTTPVEMNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSH------------ 220
            ..::|:    .|.|     :|...:|    |..|..:|||:|.||...:::.:            
  Rat   250 KALEDLGRVNRTKP-----KPPEPED----LAIICFTSGTTGNPKGAMVTHQNIMNDCSGFIKAT 305

  Fly   221 ---------QIIGSFLP--------VDSSIIQYNPN----------TLDWASGITMTINAAVFSL 258
                     .::.||||        |:..::.:...          .:|....:..||...|..|
  Rat   306 ESAFIASPEDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRL 370

  Fly   259 TSIIEDCDFDPANLCGLIEKYRISMVFVSSSQLAMLSNCPE----------FYAADLS---SVKY 310
            .:.:.|..|..||..  ::::.:.  |.|..:.|.|.:...          |:....|   .|:.
  Rat   371 LNRMFDRIFGQANTS--VKRWLLD--FASKRKEAELRSGIVRNNSLWDKLIFHKIQSSLGGKVRL 431

  Fly   311 FFYGGSNCSLEVQNKIRSRLSNECVNF-SYTLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKIVN 374
            ...|.:..|..|...:|:.|.  |..: .|..||..:..||:...|.....||.|:....||:|:
  Rat   432 MITGAAPVSATVLTFLRAALG--CQFYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYIKLVD 494

  Fly   375 -ELGEAQGPNVVGEICFNNGQKWPGYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKD 438
             |....|.....||:|......:.||.|:|..|.:..|.:.|.||||:|....:|.|.||||.|.
  Rat   495 VEDMNYQAAKGEGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKH 559

  Fly   439 MLKYQTIMYY-PSEIESVIAEMPNVVEACVFGIWDPVYGDKAAASVV--------------KKQG 488
            :.|.....|. |.:||::......|.:  ||     |:|:...|.::              :|:|
  Rat   560 IFKLAQGEYIAPEKIENIYLRSEAVAQ--VF-----VHGESLQAFLIAIVVPDVEILPSWAQKRG 617

  Fly   489 TQ----------------LEAQDVVEYVRKRIPAKFKQLNGGAL-----IVDHIIQSGNRKANRA 532
            .|                ||  |:|:..:......|:|:.|.|:     .:|:.:.:...||.|.
  Rat   618 FQGSFEELCRNKDINKAILE--DMVKLGKNAGLKPFEQVKGIAVHPELFSIDNGLLTPTLKAKRP 680

  Fly   533 ATKAEF 538
            ..:..|
  Rat   681 ELRNYF 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 124/591 (21%)
Firefly_Luc_like 55..530 CDD:213279 121/581 (21%)
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 124/591 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342967
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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