DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and Acsm3

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_017177549.1 Gene:Acsm3 / 20216 MGIID:99538 Length:593 Species:Mus musculus


Alignment Length:559 Identity:129/559 - (23%)
Similarity:223/559 - (39%) Gaps:97/559 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KSPFKTR-----NTFDENLKIWSGGEK--RSLFSPDLSIGEIIFQQMERNAMLTAQISVTENTEL 65
            |..||..     |...:.|..|:..||  :.|.:|       .|..::.|           ..||
Mouse    41 KQDFKIEIPEYFNFAKDVLDQWTNMEKAGKRLSNP-------AFWWIDGN-----------GEEL 87

  Fly    66 TW--KDIQTNAMKVASYMRK-LGLEQGDFVGVIGRLTTHLTALAYACFFNGTPYHALHTEYEQSA 127
            .|  :::...:.|.|:.:.: ..|::||.|.||............||...||......|:..|..
Mouse    88 RWSFEELGLLSRKFANILTEACSLQRGDRVMVILPKIPEWWLANVACLRTGTVLIPGTTQLTQKD 152

  Fly   128 IERLFGITKPRLIFCD---GDEFEKVQAATKGLQVQIVTMRNHPAGILRIQDILT------TPVE 183
            |......:|.:.|..|   ....:.|.|..:.|..:::..::...|...:::::.      |.|:
Mouse   153 ILYRLQSSKAKCIITDDTLAPAVDAVAAKCENLHSKLIVSQHSREGWGNLKEMMKYASDSHTCVD 217

  Fly   184 MNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQIIGSFLPVD--------SSIIQYNPNT 240
            ...         |:::||..:|||:|.||  .|.::|...|..|.|:        :|.:.:|.:.
Mouse   218 TKH---------DEMMAIYFTSGTTGPPK--MIGHTHSSFGLGLSVNGRFWLDLIASDVMWNTSD 271

  Fly   241 LDWASGITMTI------NAAVFS-------LTSIIEDCDFDPANLCGLIEKYRISMVFVSSSQLA 292
            ..||.....::      .|.||:       .|||::           .:.|:.|::...:.:...
Mouse   272 TGWAKSAWSSVFSPWTQGACVFAHYLPRFESTSILQ-----------TLSKFPITVFCSAPTAYR 325

  Fly   293 MLSNCPEFYAADLSSVKYFFYGGSNCSLEVQNKIRSRLSNECV-NFSYTLTELNSPGCLNF-NFD 355
            ||.......:...:|:|:....|...:.||..:.|.:...:.. .:..|.|.|.   |.|| ...
Mouse   326 MLVQNDMSRSYKFNSLKHCVSAGEPINPEVMEQWRKKTGLDIYEGYGQTETVLI---CGNFKGMK 387

  Fly   356 EKPNSVGRPVRGIQIKIVNELGEAQGPNVVGEICFNNGQKWP-----GYYKNPEETKKMQDSENW 415
            .||.|:|:|.....:||::|.|....|...|:|......:.|     .|..||.:|...... ::
Mouse   388 IKPGSMGKPSPAFDVKILDENGATLPPGQEGDIALQVLPERPFGLFTHYVDNPSKTASTLRG-SF 451

  Fly   416 FHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMYYPSEIESVIAEMPNVVEACVFGIWDPVYGDKAA 480
            :.|||.||||||||.:.:.|..|::........|.|:||.:.|.|::.|:.|....||:.|:...
Mouse   452 YITGDRGYMDEDGYFWFVARSDDIILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVVK 516

  Fly   481 ASVV-----KKQGTQLEAQDVVEYVRK-RIPAKFKQLNG 513
            |.:|     |....:...:::.|:|:| ..|.|:.:..|
Mouse   517 AFIVLNPDYKSHDQEQLKKEIQEHVKKTTAPYKYPRKVG 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 120/525 (23%)
Firefly_Luc_like 55..530 CDD:213279 117/505 (23%)
Acsm3XP_017177549.1 AFD_class_I 48..554 CDD:388389 125/549 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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