DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and acs-15

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_493856.3 Gene:acs-15 / 187666 WormBaseID:WBGene00019920 Length:703 Species:Caenorhabditis elegans


Alignment Length:637 Identity:126/637 - (19%)
Similarity:210/637 - (32%) Gaps:215/637 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VTENTELTWK--------DIQTNAMKVASYMRKLGLEQGD--FVG---------VIGRLTTHLTA 104
            |.:|.:|.|:        :|..|   |:..:||||:|.||  .:|         |:..:..|..:
 Worm   100 VMKNGKLEWEWITYEQAFEISDN---VSQAIRKLGIEIGDKSNIGIYSKNRPEWVLSDMAIHNFS 161

  Fly   105 LAYACFFNGTPYHALHTEYEQSAIERLFGITKPRLIFCDGD---------------------EFE 148
            ......::..|...:|         .:..:.:..|:|.|.:                     :|:
 Worm   162 NVSVPIYDNIPNEDMH---------YITNLCEIPLMFVDSEDKTTQLIKDKTYLSKSLKYIVQFD 217

  Fly   149 KVQAATKGLQVQIVTMRNHPAGILRIQDILTTPVEMNFRPVRLKDGTDQLLAILS-SSGTSGLPK 212
            ||....|.:      ..::...:....:.:....:...||  ....|.:.||.:| :|||:|.||
 Worm   218 KVSDEMKAM------AESNNFQLWSFDEFVELGKKHEHRP--HAPPTPETLATISFTSGTTGRPK 274

  Fly   213 AVTISN---------------------------------------SHQIIGS---FLPVDSSIIQ 235
            ...:::                                       :|..|||   |...|.:::.
 Worm   275 GAMLTHLNLCSTTVACEEFEHVEGELDSYLSYLPLAHVYERHCTLAHFKIGSRIGFSRGDPALLV 339

  Fly   236 YN-----PNTLDWASGI------------------TMTINAAV------FSLTSIIEDCDFDPAN 271
            .:     |.|......:                  .|.:|:|:      :.:|.        .|.
 Worm   340 EDIQALAPRTFACVPRVLGKIYKSVMSQVQDKPVKKMILNSAIAYKLYHYKMTG--------KAT 396

  Fly   272 LCGLIEKYRISMVFVSSSQLAMLSNCPEFY----AADLSSVKYFFYGGSNCSLEVQNKIRSRLSN 332
            ...|::||.:..:     |:.:..|..:|.    ..|.||:::               .|.....
 Worm   397 RDTLVDKYILHKI-----QMILGPNIKQFLIPAAKTDNSSMRF---------------ARGAFGI 441

  Fly   333 ECVNFSYTLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKIVN--ELGEAQGPNVVGEICFNNGQK 395
            |.:.. |.|||.:.|..:.. ..:...|||.|:....||:|:  |||.....| .||:.......
 Worm   442 EILEL-YGLTETSGPTTIQL-VGDMLGSVGPPISCTSIKLVDIAELGYFVDEN-GGEVLVKGHNV 503

  Fly   396 WPGYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKY-QTIMYYPSEIESVIAEM 459
            ..||||:|:.|......:.:..|||:|....:|.|.:|||..::||. |.....|...||:....
 Worm   504 TSGYYKDPKATASAFTEDGFMKTGDIGKFTPEGTLQLIDRRDNVLKLPQGEFVAPDLTESLYISS 568

  Fly   460 PNVVEACVFG-----------IWDPVYGDKAAASVVKKQGTQLE--------AQDVV-------- 497
            ..|.:.||.|           :.||.|....|......:|...|        |:||:        
 Worm   569 KFVQQICVHGNKEKPWLVAVVVPDPEYLASHANLEHNIEGKTYEELCKIPALAEDVLRDFVDLTK 633

  Fly   498 EYVRKR---------IPAKFKQLNGGALIVDHIIQSGNRKANRAATKAEFLR 540
            |:.|.|         .|..|...||        :.:...|..|.|. |:|.:
 Worm   634 EHNRPRHEGVFAIHLTPIAFSPQNG--------LTTPTHKNKRTAI-AQFFK 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 126/635 (20%)
Firefly_Luc_like 55..530 CDD:213279 122/625 (20%)
acs-15NP_493856.3 PLN02736 96..686 CDD:178337 126/637 (20%)
AFD_class_I 107..683 CDD:302604 123/630 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160547
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

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