DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5568 and Acsl3

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_476448.1 Gene:Acsl3 / 114024 RGDID:70552 Length:720 Species:Rattus norvegicus


Alignment Length:628 Identity:138/628 - (21%)
Similarity:233/628 - (37%) Gaps:175/628 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EKRSLFSPDLSIGEIIFQQMERNAMLTAQISVTENTELTWKDIQTNAMKVASYMRKLGLEQGDFV 92
            :||.|.:.::...|   .:::.|..:..::.:.....|:::|:...|:...:.::.||.:....:
  Rat   101 DKRLLGTREILNEE---DEIQPNGKVFKKVILGHYNWLSYEDVFIRALDFGNGLQMLGQKPKANI 162

  Fly    93 GVIGRLTTHLTALAYACF-FN----------GTP--YHALH----------TEYEQSAIERLFGI 134
            .:...........|.||| :|          |.|  .|.|:          .|..|:.::.:..:
  Rat   163 AIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHGLNETEVTNIITSKELLQTKLKDIVSL 227

  Fly   135 TKPRL---IFCDG-----DEFEK-----VQAATKGLQVQI-VTMRNHPAGILRIQDILTTPVEMN 185
            . |||   |..||     .||.|     ..||.:.|.|:. |..:.|.                 
  Rat   228 V-PRLRHIITVDGKPPTWSEFPKGVIVHTMAAVQALGVKADVDKKAHS----------------- 274

  Fly   186 FRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQIIGS-------------------FLPVDS 231
             :|:     ...:..|:.:||::|:||.|.||:|: ||.|                   :||:..
  Rat   275 -KPL-----PSDIAVIMYTSGSTGIPKGVMISHSN-IIASITGMARRIPRLGEEDVYIGYLPLAH 332

  Fly   232 SI--------------IQY-NPNTL-DWASGITM-----------TINAAV--------FSLTSI 261
            .:              |.| :|.|| |.:|.|..           |:.|||        .::.:.
  Rat   333 VLELSAELVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDTSVLKPTLMAAVPEIMDRIYKNVMNK 397

  Fly   262 IEDCDFDPANLCGLIEKYRISMVFVSSSQLAMLSNCPEFYAADL-----SSVKYFFYGGSNCSLE 321
            :.:......||..|...|::..:    |:......|..|...::     .:::....||:..|..
  Rat   398 VNEMSAFQRNLFILAYNYKMEQI----SKGCSTPLCDRFVFRNVRRLLGGNIRVLLCGGAPLSAT 458

  Fly   322 VQNKIRSRLSNEC----VNFSYTLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKIVN-ELG---E 378
            .|     |..|.|    |...|.|||....|.:...:|.....||.|:...:||:.| |.|   .
  Rat   459 TQ-----RFMNICFCCPVGQGYGLTESTGAGTITEVWDYNTGRVGAPLVCCEIKLKNWEEGGYFN 518

  Fly   379 AQGPNVVGEICFNNGQKWPGYYKNPEETK----KMQDSENWFHTGDLGYMDEDGYLFIIDRLKDM 439
            ...|:..|||.........|||||..:||    :.::.:.|..|||:|..|.||.|.||||.||:
  Rat   519 TDKPHPRGEILIGGQNVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFDPDGCLKIIDRKKDL 583

  Fly   440 LKYQTIMYYP-SEIESVIAEMPNVVEACVFGIWDPVYGDKAAASVV--KKQGTQLEAQDVVEYVR 501
            :|.|...|.. .::|:.:..:|.:...|.:.   ..|.......||  :|:.|:|          
  Rat   584 VKLQAGEYVSLGKVEAALKNLPLIDNICAYA---NSYHSYVIGFVVPNQKELTEL---------- 635

  Fly   502 KRIPAKFKQLNGGALIVDHIIQSGNRKANRAATKAEFLRIMEK 544
                |:.|..||          :.....|.:..:.|.|:::.:
  Rat   636 ----ARTKGFNG----------TWEELCNSSEMENEVLKVLSE 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 134/615 (22%)
Firefly_Luc_like 55..530 CDD:213279 130/585 (22%)
Acsl3NP_476448.1 PLN02387 30..717 CDD:215217 138/628 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342954
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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