DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5568 and Acsl4

DIOPT Version :10

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001418578.1 Gene:Acsl4 / 113976 RGDID:69401 Length:711 Species:Rattus norvegicus


Alignment Length:674 Identity:133/674 - (19%)
Similarity:239/674 - (35%) Gaps:162/674 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SPFKTRNTFDE----------------NLKIWSGGEKRSLFSPDLSIGEIIFQQMERNAMLTAQI 57
            ||:::...||.                :..:...|:|.||.:.::...|   .:|:.|..:..::
  Rat    57 SPYRSVTHFDSLAVIDIPGADTLDKLFDHAVAKFGKKDSLGTREILSEE---NEMQPNGKVFKKL 118

  Fly    58 SVTENTELTWKDIQTNAMKVASYMRKLGLEQGDFVGVIGRLTTHLTALAYACFFNGTPYHALHTE 122
            .:.....:.:.::........|.:..|||:..:.:.:...........|..||....|...|:..
  Rat   119 ILGNYKWINYLEVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIAAQTCFKYNFPLVTLYAT 183

  Fly   123 YEQSAI-------ERLFGITKPRLIFCDGDEFEKVQAATKGLQV---------QIVTMRNHPAGI 171
            ..:.|:       |..:.||...|:      ..|::||...:..         :.:....:|.|:
  Rat   184 LGKEAVVHGLNESEASYLITSVELL------ESKLKAALLDINCVKHIIYVDNKTINRAEYPEGL 242

  Fly   172 -----LRIQDILTTPVEMNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQIIG------- 224
                 ..::::.:.|...:..|.|  .....:..::.:||::|.||.|.:.:|:.|.|       
  Rat   243 EIHSMQSVEELGSKPENSSIPPSR--PTPSDMAIVMYTSGSTGRPKGVMMHHSNLIAGMTGQCER 305

  Fly   225 -----------SFLPV--------DSSIIQY-------NPNTL-DWASGITM-----------TI 251
                       .:||:        :.|...|       :|.|| |.:|.|..           |:
  Rat   306 IPGLGPKDTYIGYLPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSSKIKKGSKGDCTVLKPTL 370

  Fly   252 NAAV--------FSLTSIIEDCDFDPANLCGLIEKYRISMVFVSSSQLAMLSNCPEFYAADL--- 305
            .|||        .::.|.:::.::....|..:...|::..  :.....|.|.|...|.....   
  Rat   371 MAAVPEIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQ--IKKGYDAPLCNLILFKKVKALLG 433

  Fly   306 SSVKYFFYGGSNCSLEVQNKIRSRLSNEC----VNFSYTLTELNSPGCLNFNFDEKPNSVGRPVR 366
            .:|:....||:..|.:..     |..|.|    :...|.|||....|.:....|.....||.|:.
  Rat   434 GNVRMMLSGGAPLSPQTH-----RFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLI 493

  Fly   367 GIQIKIVN--ELGEA--QGPNVVGEICFNNGQKWPGYYKNPEETKK----MQDSENWFHTGDLGY 423
            ..:||:.:  |.|..  ..||..|||.........||:||.|:|.:    .::.:.||.|||:|.
  Rat   494 CCEIKLKDWQEGGYTVHDKPNPRGEIVIGGQNISMGYFKNEEKTAEDYSVDENGQRWFCTGDIGE 558

  Fly   424 MDEDGYLFIIDRLKDMLKYQTIMYYP-SEIESVIAEMPNVVEACVFGIWDPVY-------GDKAA 480
            ...||.|.||||.||::|.|...|.. .::|:.:...|.:...|.|...|..|       ..|..
  Rat   559 FHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKL 623

  Fly   481 ASVVKKQGTQ--------------------LEAQDVVEYVRKRIPAKFK-----QLNGGALIVDH 520
            ..:.:::|.:                    .||.:.::..|..||.|.:     ......|:.|.
  Rat   624 TLLAQQKGVEGSWVDICNNPAMEAEILKEIREAANAMKLERFEIPIKVRLSPEPWTPETGLVTDA 688

  Fly   521 IIQSGNRKANRAATKAEFLRIMEK 544
            .      |..|...|..:|:.:|:
  Rat   689 F------KLKRKELKNHYLKDIER 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 Firefly_Luc_like 55..528 CDD:341237 117/594 (20%)
Acsl4NP_001418578.1 LC_FACS_euk1 121..696 CDD:341294 119/595 (20%)

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