DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5568 and acsm3

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_002932029.3 Gene:acsm3 / 100491087 XenbaseID:XB-GENE-486978 Length:581 Species:Xenopus tropicalis


Alignment Length:497 Identity:114/497 - (22%)
Similarity:187/497 - (37%) Gaps:81/497 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 ENTELTWKDIQTNAMKVASYMR-KLGLEQGDFVGVIGRLTTHLTALAYACFFNGTP--------- 115
            |..:.:::::...:.|.|:.:. ...|:.||.|.||.........|..||...|..         
 Frog    86 EEVKWSFEELGFLSRKAANVLSDACNLKPGDRVIVILPRVPEWWLLNVACIRAGVVLIPGTTQLT 150

  Fly   116 ----YHALHTEYEQSAIERLFGITKPRLIFCDGDEFEKVQAATKGLQVQIVTMRNHPAGILRIQD 176
                .|.|.|...:..      ||...|:    :..:.|.|.:..||.:::.......|.|..:.
 Frog   151 AKDILHRLQTSMAKCI------ITSDCLV----EAVDSVAAQSPFLQTKMLISTERRDGWLDFKG 205

  Fly   177 ILTTPVEMNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQIIGSFLPVDSSI-------- 233
            :...   .|.:...:|..:...:.|..:|||:|.||..  .:||...|..|.|:...        
 Frog   206 LFQV---ANDKHTCVKTKSSDPMTIFFTSGTTGSPKMT--EHSHCSYGLGLKVNGKYWMDLTPTD 265

  Fly   234 IQYNPNTLDWASGITMTI------NAAVFSL------TSIIED--CDFDPANLCGLIEKYRISMV 284
            |.:|.:...||.....::      .:.||:.      |:|:..  ..|.....|.....||    
 Frog   266 IVWNMSDTGWAKSAWSSVFAPWIQGSCVFAHSMPRFDTNIVLKTLSTFPITTFCSAPTAYR---- 326

  Fly   285 FVSSSQLAMLSNCPEFYAADLSSVKYFFYGGSNCSLEVQNKIRSRLSNECV-NFSYTLTELNSPG 348
                  :.:|.|   |.:....|:::....|...:.:|..:.:.:...:.. .:..|.|.|.   
 Frog   327 ------MLVLQN---FASYKFKSLQHCVSAGEPINPQVMEQWKEQTGLDIYEGYGQTETVLI--- 379

  Fly   349 CLNF-NFDEKPNSVGRPVRGIQIKIVNELGEAQGPNVVGEICFNNGQKWP-----GYYKNPEETK 407
            |..| ....||.|:|:|.....::||:|.|........|:|......:.|     .|..:||.|.
 Frog   380 CGTFKGMKIKPGSMGKPSPAYDVEIVDENGNVLPQGKEGDIAIRILPQKPFCLFSQYTGDPERTA 444

  Fly   408 KMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMYYPSEIESVIAEMPNVVEACVFGIWD 472
            ..:.. |::.|||.|..|||||.:.:.|..|::........|.|:||.:.|.|.|.|:.|....|
 Frog   445 STRRG-NFYLTGDRGIKDEDGYFWFVGRSDDVILSSGYRIGPFEVESALIEHPAVAESAVVSSPD 508

  Fly   473 PVYGDKAAASVV---KKQGTQLE--AQDVVEYVRKRIPAKFK 509
            |:.|:...|.||   ...|...|  |.::.|:|| .|.|.:|
 Frog   509 PIRGEVVKAFVVLAPAYNGYDPEKLALELQEHVR-NITAPYK 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 114/497 (23%)
Firefly_Luc_like 55..530 CDD:213279 114/497 (23%)
acsm3XP_002932029.3 MACS_euk 49..578 CDD:341251 114/497 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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