DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5568 and acsm3

DIOPT Version :9

Sequence 1:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001104706.1 Gene:acsm3 / 100002035 ZFINID:ZDB-GENE-080220-22 Length:591 Species:Danio rerio


Alignment Length:508 Identity:113/508 - (22%)
Similarity:195/508 - (38%) Gaps:105/508 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 TELTW--KDIQTNAMKVASYMRKL-GLEQGDFVGVIGRLTTHLTALAYACFFNGT---PYHALHT 121
            ||:.|  :::..::.|:|:.:|:: .||:||.|.:|.........:..||...||   |..:..|
Zfish    94 TEVRWSFEELGFHSRKLANVLRQVCSLERGDRVFLILPRVPEWWLVNVACIRTGTVLIPGTSQLT 158

  Fly   122 EYEQSAIERLFGITKPRLIFCDGDEFEKVQAATKGLQVQIVTMRNHPAGILRIQDI-------LT 179
            ..:.          :.|||             |.|.:..|......|     :.|.       ::
Zfish   159 ARDM----------RHRLI-------------TSGAKCVITDETLAP-----LLDTVALDCPSIS 195

  Fly   180 TPVEMNFRPV-----------RLKD-------GTDQLLAILSSSGTSGLPKAVTISNSHQIIGSF 226
            |.:.::.:|:           |:.|       .:::.:.|..:|||:|.||..  .:||...|..
Zfish   196 TKLLLSHKPMDGWGNLTELMGRVSDDHVCVDTSSEEPMTIFFTSGTTGSPKMT--QHSHCSYGLG 258

  Fly   227 LPVDSSI--------IQYNPNTLDWASGITMTI------NAAVFSLTSIIEDCDFDPANLCGLIE 277
            |.|:...        :.:|.:...||.....::      .|.||    :.....||...:...:.
Zfish   259 LTVNGRYWLDLTEQDVFWNTSDTGWAKSAWSSVFAPWIQGACVF----VHHMPRFDTNTVLKTLS 319

  Fly   278 KYRISMVFVSSSQLAMLSNCPEFYAADLSSVKYFFYGGSNC-------SLEVQNKIRSRLSNECV 335
            .|.|:....:.:...||      ...|||  ||.|....:|       :.||..|.: .|:...:
Zfish   320 HYPITTFCTAPTAYRML------VQDDLS--KYKFQALEHCLCAGEPINPEVMCKWK-ELTGLDI 375

  Fly   336 NFSYTLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKIVNELGEAQGPNVVGEICFNNGQKWP--- 397
            ...|..||.............||.|.|:...|..:::|:|.|........|::......:.|   
Zfish   376 YEGYGQTETVLIAGTFKGMKIKPGSFGKASPGYDVQVVDENGSVVPKGQEGDLGIRVKPERPFSL 440

  Fly   398 --GYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMYYPSEIESVIAEMP 460
              .|...|..|.:....: ::.|||.|.||::|||:.|.|..|::........|.|:|:.:.|.|
Zfish   441 FTEYTGEPVRTAECFRGD-FYLTGDRGMMDDEGYLWFIGRSDDVILSAGYRIGPFEVENALIEHP 504

  Fly   461 NVVEACVFGIWDPVYGDKAAASVVKKQGTQLEA-QDVVEYVR---KRIPAKFK 509
            .|.|:.|....|||.|:...|.||.....:..| :::::.::   |.|.|.:|
Zfish   505 AVAESAVVSSPDPVRGEVVKAFVVLTADFKSRAHKELIKELQTHVKSITAPYK 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5568NP_647992.1 CaiC 35..540 CDD:223395 113/508 (22%)
Firefly_Luc_like 55..530 CDD:213279 113/508 (22%)
acsm3NP_001104706.1 Acs 54..583 CDD:223442 113/508 (22%)
AFD_class_I 57..586 CDD:302604 113/508 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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