DRSC/TRiP Functional Genomics Resources

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Protein Alignment mad2 and Rev7

DIOPT Version :9

Sequence 1:NP_647991.1 Gene:mad2 / 38656 FlyBaseID:FBgn0035640 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_649555.1 Gene:Rev7 / 40677 FlyBaseID:FBgn0037345 Length:198 Species:Drosophila melanogaster


Alignment Length:205 Identity:53/205 - (25%)
Similarity:85/205 - (41%) Gaps:35/205 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AQIIVEYLKYGINSILFQRGIYPAEDFNNTQQYGLTILMSKDPKIKTFLQNVLSQTEEWLSKNMI 81
            |.||||.::..:|.||:.|||||:..|...:.|...|.:|..|.:..:|..||...:|.|.:..:
  Fly     7 ADIIVEAMEVLVNHILYVRGIYPSHIFKMKRMYNSPIYVSIFPPLNNYLAGVLKSAQELLRRREL 71

  Fly    82 NKISMVITNAHTKEVLECWDFNMQAELGDGDISDPTKATTTKELSRIQNEIRDVMRQISATVSYL 146
            ..:.:::   :.||..:...:.||.|      :..:.......|...:..:|.|:.:||..::..
  Fly    72 QCLELIV---YQKENEKLESYKMQLE------TQRSGLPAEDHLMEFEQNMRSVIYKISQRLNQA 127

  Fly   147 PLLDC-ICTFDIMIHTLQNT-----------ELPAKW--------DETGAIVIQNPQAVQLRSFS 191
            |.|.. .|.|.:.:||.|..           |.|  |        ..||..|...|.|   |...
  Fly   128 PKLPAGSCQFKVHLHTTQEAFIRFSHDSQYQEFP--WLQTQKTESQATGRTVYLLPLA---RVDD 187

  Fly   192 TGLHKVDTVV 201
            .|| |:|.::
  Fly   188 LGL-KMDVLI 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mad2NP_647991.1 HORMA 13..195 CDD:280464 50/197 (25%)
Rev7NP_649555.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446437
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11842
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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