DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6k and prkchb

DIOPT Version :10

Sequence 1:NP_523941.2 Gene:S6k / 38654 FlyBaseID:FBgn0283472 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001038271.1 Gene:prkchb / 556591 ZFINID:ZDB-GENE-041001-104 Length:676 Species:Danio rerio


Alignment Length:365 Identity:141/365 - (38%)
Similarity:217/365 - (59%) Gaps:11/365 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NLHQDT----EGQETIQLCEENVNPGKIKLGPKDFELKKVLGKGGYGKVFQVRKTAGRDANKYFA 107
            :||..:    ....:|:..||..:...:|:..:||...:|||||.:|||...|.   :..::.||
Zfish   313 SLHMSSVRSQSSTTSIETTEEESDEEAVKVCLEDFSFLQVLGKGSFGKVMLARL---KSDHRVFA 374

  Fly   108 MKVLKKASIVTNQKDTAHTRAERNILE-AVKHPFIVELVYAFQTDGKLYLILEYLSGGELFMHLE 171
            :|:||| .::..:.|...|..|:.:|. |.:|||:.:|.|.|||..:|:.::|:::||:|..|::
Zfish   375 VKMLKK-DVILQEDDVEATMTEKRVLTLAHQHPFLTQLYYCFQTTERLFFVMEFVNGGDLMFHIQ 438

  Fly   172 REGIFLEDTTCFYLSEIILALGHLHKLGIIYRDLKPENILLDAQGHVKLTDFGLCKEHIQEGIVT 236
            :...|.|....||.:|:..||..||..||||||||.:|||||..||.||.|||:|||.|..|.:|
Zfish   439 KCRRFDEPRAQFYAAEVTSALKFLHSKGIIYRDLKLDNILLDRDGHCKLADFGMCKEEIFNGKLT 503

  Fly   237 HTFCGTIEYMAPEILTRSGHGKAVDWWSLGALMFDMLTGVPPFTAENRKKTIETILKAKLNLPAY 301
            .|||||.:|:|||||....:|.:||||:||.|:::||:|..||.||...:..|.|||.::...::
Zfish   504 STFCGTPDYIAPEILQEELYGVSVDWWALGVLLYEMLSGHAPFEAETEDELFECILKDEIIYSSW 568

  Fly   302 LTPEARDLVRRLMKRQEPQRLGSGPEDAA--AVQIHPFFKHVNWDDVLARRLEPPIKPLLRSEDD 364
            |:.||.|:::.|:.|....|||....|..  |:..|.||..::|:.:..|.:.||..|.:.|.:|
Zfish   569 LSYEAEDILKGLLTRDPACRLGCIDNDGGEEAITAHAFFTGLDWEKLYRREITPPFTPRINSIED 633

  Fly   365 VSQFDTRFTRQIPVDSPDDTTLSESANLIFQGFTYVAPSI 404
            |:.||..||::.|..:|.:.:|.......|:.|:|:||.:
Zfish   634 VNNFDPDFTQEDPCLTPIEESLFPFHQDGFKDFSYIAPEL 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kNP_523941.2 STKc_p70S6K 81..402 CDD:270736 131/323 (41%)
prkchbNP_001038271.1 C2_PKC_epsilon 3..133 CDD:175981
C1_nPKC_epsilon-like_rpt1 156..219 CDD:410385
C1_nPKC_epsilon-like_rpt2 234..288 CDD:410388
Protein Kinases, catalytic domain 351..673 CDD:473864 133/325 (41%)
Blue background indicates that the domain is not in the aligned region.

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