DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6k and Rps6ka6

DIOPT Version :9

Sequence 1:NP_001261450.1 Gene:S6k / 38654 FlyBaseID:FBgn0283472 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001178650.1 Gene:Rps6ka6 / 317203 RGDID:1560817 Length:860 Species:Rattus norvegicus


Alignment Length:404 Identity:186/404 - (46%)
Similarity:264/404 - (65%) Gaps:11/404 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SDPSELFDLELHDLELQDDKARDSDDDRIELDDVDL-EPELCINLHQDTEGQETIQLCEENVNPG 68
            |:|..:|.::...:.::..:.::.:|.::..:.:|. ||..|  ..:|...:..|   .::|..|
  Rat   122 SEPQIVFTMKTAAMVIRQHEHKEVNDLKMVDEPMDEGEPVFC--RREDLVKEIPI---TQHVKEG 181

  Fly    69 KIKLGPKDFELKKVLGKGGYGKVFQVRKTAGRDANKYFAMKVLKKASIVTNQKDTAHTRAERNIL 133
            ..|..|..|:|.||||:|.:||||.|||..|.||.:.:|||||:|||:  ..:|...|:.||:||
  Rat   182 YEKADPAQFDLLKVLGQGSFGKVFLVRKKTGPDAGQLYAMKVLRKASL--KVRDRVRTKMERDIL 244

  Fly   134 EAVKHPFIVELVYAFQTDGKLYLILEYLSGGELFMHLEREGIFLEDTTCFYLSEIILALGHLHKL 198
            ..|.|||||:|.|||||:|||||||::|.||::|..|.:|.:|.|:...|||:|:.|||.|||:|
  Rat   245 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDVFTRLSKEVLFTEEDVKFYLAELALALDHLHRL 309

  Fly   199 GIIYRDLKPENILLDAQGHVKLTDFGLCKEHIQEGIVTHTFCGTIEYMAPEILTRSGHGKAVDWW 263
            ||:||||||||||||..||:|||||||.||.:.:....::||||:||||||::.|.||.::.|||
  Rat   310 GIVYRDLKPENILLDEIGHIKLTDFGLSKESVDQEKKAYSFCGTVEYMAPEVVNRRGHSQSADWW 374

  Fly   264 SLGALMFDMLTGVPPFTAENRKKTIETILKAKLNLPAYLTPEARDLVRRLMKRQEPQRLGSGPED 328
            |.|.|||:||||..||..::|.:|:..||||||.:|.:|:.||:.|:|.|.||....||||  |.
  Rat   375 SYGVLMFEMLTGTLPFQGKDRNETMNMILKAKLGMPQFLSAEAQSLLRMLFKRNPANRLGS--EG 437

  Fly   329 AAAVQIHPFFKHVNWDDVLARRLEPPIKPLLRSEDDVSQFDTRFTRQIPVDSPDDTTLSESANLI 393
            ...|:.|.||..::|:.:..|.::||.:|.....||...||..||.:.|.||| ....|.:|:.:
  Rat   438 VEEVKRHAFFSSIDWNKLYKREVQPPFRPASGKPDDTFCFDPEFTAKTPKDSP-GLPASANAHQL 501

  Fly   394 FQGFTYVAPSILED 407
            |:||::||.||.|:
  Rat   502 FKGFSFVATSIAEE 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kNP_001261450.1 PTZ00263 76..397 CDD:140289 165/320 (52%)
STKc_p70S6K 81..402 CDD:270736 166/320 (52%)
Rps6ka6NP_001178650.1 S_TKc 190..447 CDD:214567 145/260 (56%)
STKc_RSK_N 194..508 CDD:270734 165/318 (52%)
STKc_RSK_C 543..829 CDD:270993
Pkinase 543..800 CDD:278497
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334253
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1132245at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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