DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S6k and gad8

DIOPT Version :9

Sequence 1:NP_001261450.1 Gene:S6k / 38654 FlyBaseID:FBgn0283472 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_588010.1 Gene:gad8 / 2539206 PomBaseID:SPCC24B10.07 Length:569 Species:Schizosaccharomyces pombe


Alignment Length:413 Identity:172/413 - (41%)
Similarity:257/413 - (62%) Gaps:20/413 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DVSDPSELFDLELHDLELQDDKARDSDDDRIELDDVDLEPELCIN--------LHQDTEGQETIQ 59
            |||..|:| .|.:: |.....::|:...:...|..:.|.|...:|        ||..: |:..:|
pombe   153 DVSRYSKL-SLNIY-LRSSSSRSRNGMGNDAFLGGIKLSPSFIVNKLTDEWVPLHGGS-GELRVQ 214

  Fly    60 LCEENVNPGKIKLGPKDFELKKVLGKGGYGKVFQVRKTAGRDANKYFAMKVLKKASIVTNQKDTA 124
            :..:......:.:..  |||.||:|||.:|||.||||   ||.::.:|:|.:|||.|| ::.:..
pombe   215 MLYKPNQSTPLTIDA--FELLKVVGKGSFGKVMQVRK---RDTSRIYALKTMKKAHIV-SRSEVD 273

  Fly   125 HTRAERNILEAVKHPFIVELVYAFQTDGKLYLILEYLSGGELFMHLEREGIFLEDTTCFYLSEII 189
            ||.|||.:|..|.:||||.|.::||:.|||||:|.:::|||||.||:|||.|......||::|::
pombe   274 HTLAERTVLAQVNNPFIVPLKFSFQSPGKLYLVLAFVNGGELFHHLQREGCFDTYRAKFYIAELL 338

  Fly   190 LALGHLHKLGIIYRDLKPENILLDAQGHVKLTDFGLCKEHIQEGIVTHTFCGTIEYMAPEILTRS 254
            :||..||:..:|||||||||||||..||:.|.||||||.::.:...|:|||||.||:|||:|...
pombe   339 VALECLHEFNVIYRDLKPENILLDYTGHIALCDFGLCKLNMAKTDRTNTFCGTPEYLAPELLLGH 403

  Fly   255 GHGKAVDWWSLGALMFDMLTGVPPFTAENRKKTIETILKAKLNLPAYLTPEARDLVRRLMKRQEP 319
            |:.|.||||:||.|:::|:||:|||..||..:....||:..|..|..:..:|:||:..|:.|...
pombe   404 GYTKVVDWWTLGVLLYEMITGLPPFYDENINEMYRKILQDPLRFPDNIDEKAKDLLSGLLTRAPE 468

  Fly   320 QRLGSGPEDAAAVQIHPFFKHVNWDDVLARRLEPPIKPLLRSEDDVSQFDTRFTRQIPVDS-PDD 383
            :|||||  .|..::.||||..::|..:.|::::||.||.:.|..|.|.||:.||.:||:|| ..|
pombe   469 KRLGSG--GAQEIKNHPFFDDIDWKKLCAKKIQPPFKPSVESAIDTSNFDSEFTSEIPMDSVVAD 531

  Fly   384 TTLSESANLIFQGFTYVAPSILE 406
            :.|||:....|..::|..|:.::
pombe   532 SHLSETVQQRFANWSYQRPTTID 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kNP_001261450.1 PTZ00263 76..397 CDD:140289 154/321 (48%)
STKc_p70S6K 81..402 CDD:270736 152/321 (47%)
gad8NP_588010.1 YPK1_N_like 66..225 CDD:212165 16/74 (22%)
PTZ00263 214..545 CDD:140289 155/338 (46%)
STKc_YPK1_like 235..547 CDD:270737 150/317 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0598
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100157
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R469
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.740

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