DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6k and rps6ka1

DIOPT Version :9

Sequence 1:NP_001261450.1 Gene:S6k / 38654 FlyBaseID:FBgn0283472 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_012811865.1 Gene:rps6ka1 / 100144704 XenbaseID:XB-GENE-479496 Length:750 Species:Xenopus tropicalis


Alignment Length:420 Identity:196/420 - (46%)
Similarity:260/420 - (61%) Gaps:39/420 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VDLEPELCINLHQDTE-----GQET----------IQLCE-------------------ENVNPG 68
            |||.||:.: :|::||     |:|:          |...|                   .:|..|
 Frog     7 VDLWPEVEV-VHEETENGHVGGEESGRHISKVKPEISWIEREFFLLYKDEVVVKEIPITHHVKEG 70

  Fly    69 KIKLGPKDFELKKVLGKGGYGKVFQVRKTAGRDANKYFAMKVLKKASIVTNQKDTAHTRAERNIL 133
            ..|.....|.|.||||:|.:||||.|||....|||:.:||||||||::  ..:|...|:.||:||
 Frog    71 SEKADQSHFVLLKVLGQGSFGKVFLVRKITPPDANQLYAMKVLKKATL--KVRDRVRTKMERDIL 133

  Fly   134 EAVKHPFIVELVYAFQTDGKLYLILEYLSGGELFMHLEREGIFLEDTTCFYLSEIILALGHLHKL 198
            ..|.|||:|.|.|||||:|||||||::|.||:||..|.:|.:|.|:...|||:|:.|.|.|||.|
 Frog   134 ADVHHPFVVRLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 198

  Fly   199 GIIYRDLKPENILLDAQGHVKLTDFGLCKEHIQEGIVTHTFCGTIEYMAPEILTRSGHGKAVDWW 263
            |||||||||||||||.:||:|||||||.||.|......::||||:||||||::.|.||..:.|||
 Frog   199 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWW 263

  Fly   264 SLGALMFDMLTGVPPFTAENRKKTIETILKAKLNLPAYLTPEARDLVRRLMKRQEPQRLGSGPED 328
            |.|.|||:||||..||..::||:|:..||||||.:|.:|:.||:.|:|.|.||....|||||.|.
 Frog   264 SYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSNEAQGLLRSLFKRNPTNRLGSGVEG 328

  Fly   329 AAAVQIHPFFKHVNWDDVLARRLEPPIKPLLRSEDDVSQFDTRFTRQIPVDSPDDTTLSESANLI 393
            |..::.||||..::|:.:..|.:.||.||.:...||...|||.||.:.|.||| ....|..|:.:
 Frog   329 AEEIKRHPFFSTIDWNKLYRRDMSPPFKPAVTQPDDTYYFDTEFTSRTPKDSP-GIPPSAGAHQL 392

  Fly   394 FQGFTYVAPSIL-EDMHRANRMPARSPRRT 422
            |:||::|||.:: ||..:.:..|..|..:|
 Frog   393 FRGFSFVAPVLVEEDAKKTSSPPVLSVPKT 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kNP_001261450.1 PTZ00263 76..397 CDD:140289 171/320 (53%)
STKc_p70S6K 81..402 CDD:270736 172/320 (54%)
rps6ka1XP_012811865.1 S_TKc 79..338 CDD:214567 149/260 (57%)
STKc_RSK_N 83..399 CDD:270734 171/318 (54%)
PKc_like 431..721 CDD:304357
Pkinase 433..690 CDD:278497
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1132245at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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