Sequence 1: | NP_001286950.1 | Gene: | Bre1 / 38652 | FlyBaseID: | FBgn0086694 | Length: | 1044 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001273501.1 | Gene: | RNF40 / 9810 | HGNCID: | 16867 | Length: | 1001 | Species: | Homo sapiens |
Alignment Length: | 1096 | Identity: | 471/1096 - (42%) |
---|---|---|---|
Similarity: | 659/1096 - (60%) | Gaps: | 155/1096 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SKRSADDATGSSCLVAAAAAGQPPIKKVH---------FEPHLIGPVSTLEEMDIKVLEFQNKKL 57
Fly 58 AQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVVNRYWNQLNEDIRVLLQRFDAE----TADEL 118
Fly 119 ENRNE-----------------------------NEVTTSFLAQLSTWDKEELDEKLANRVQVSK 154
Fly 155 RAVAKIVQVIDRLMQRNEKITHVLKGDSLASAGSGSGAGAGGEEEQQQASGDAETTTSSAGVHAL 219
Fly 220 EETLKQTHIEIMSENHKLQNLNTSLHEKFHTMSLKMKEYQDAHTAKETENAELKNQIDELQYDLE 284
Fly 285 KIHCRNDKLENHLAEAIEKLKAYHQIYGDPNKSTNSAKTPTTTGSGGATTSVNSQLLEELQKELE 349
Fly 350 EYRELANNRLQELDKLHATHRETLKEVEKLKMDIRQLPESVIVETTEYKCLQSQFSVLYNESMQI 414
Fly 415 KTMLDETRNQLQTSKNQHLRQIEVMESEELIAQKKVRSEMIQMEDVLALIRKEYETLRIEFEQNM 479
Fly 480 AANEQTAPINREMRHLITSLQNHNGQLKGEVQRYKRKYKDTSTDNLKLRQELADA------LATL 538
Fly 539 EGNKLQAATGAAGEEIKQENSTGVKEENSNNVSASGQTNQTNSGNDTNVAIKEENHISAEDEADD 603
Fly 604 EASGKDVKDGIKQEKLSSGDAAAA----EKKDSPGPGNSTSSATNSVPVKNEKDSKDGVKGK--D 662
Fly 663 VKAVESETVRDLKAQLKKALNDQKEMKLLLDMYKGVSKDQRDKVQLMATEKKLRSEIEELRQQLK 727
Fly 728 KLQESKREERKKLADEEALRKIKQLEEQKYELQKQMANHKPTDNSWGSGAPGTANYTRPFVGSHE 792
Fly 793 EEALLNEMEVTGQAFEDMQEQNSRLIQQLREKDDANFKLMSERIKANQLHKLLREEKTVLEDQMA 857
Fly 858 TATTQIEAMHIVLRKLEEKERSLQATVASIEKELMLRQQAMEMHKRKAIESAQSAADLKLHLEKY 922
Fly 923 HAQMKEAQQVVAEKTSSLEAEAYKTKRLQEELAQFKRKAERMKKMEMSGTTIDEVMIEEIREYKE 987
Fly 988 TLTCPSCKVKRKDAVLSKCFHVFCYDCLRTRYETRQRKCPKCNCAFGANDYHRLYL 1043 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Bre1 | NP_001286950.1 | SMC_prok_B | <235..987 | CDD:274008 | 346/763 (45%) |
AAA_23 | <654..762 | CDD:290211 | 60/109 (55%) | ||
zf-C3HC4_2 | 991..1029 | CDD:290634 | 26/37 (70%) | ||
RNF40 | NP_001273501.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..32 | 10/36 (28%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 116..146 | 3/29 (10%) | |||
SMC_N | 231..920 | CDD:330553 | 339/754 (45%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 518..652 | 32/155 (21%) | |||
RING-HC_RNF40 | 945..999 | CDD:319729 | 38/53 (72%) | ||
RING-HC finger (C3HC4-type) | 948..986 | CDD:319729 | 26/37 (70%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165155502 | |
Domainoid | 1 | 1.000 | 708 | 1.000 | Domainoid score | I121 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0978 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H8856 | |
Inparanoid | 1 | 1.050 | 805 | 1.000 | Inparanoid score | I498 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3888 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D139233at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001777 | |
OrthoInspector | 1 | 1.000 | - | - | oto90168 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103285 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23163 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R146 |
SonicParanoid | 1 | 1.000 | - | - | X1307 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.740 |