Sequence 1: | NP_001286950.1 | Gene: | Bre1 / 38652 | FlyBaseID: | FBgn0086694 | Length: | 1044 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_067076.2 | Gene: | TRIM39 / 56658 | HGNCID: | 10065 | Length: | 518 | Species: | Homo sapiens |
Alignment Length: | 366 | Identity: | 76/366 - (20%) |
---|---|---|---|
Similarity: | 146/366 - (39%) | Gaps: | 87/366 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 629 KKDSPGPGNSTSSATNSVPVKNEKDSKDGVKGKDVKAVESETVRD--LKAQLKKALN-----DQK 686
Fly 687 EMKLLLDMYKGVSKDQR--------DKVQLMATEKKLRSEIEELRQQLKKLQESKREERKKLADE 743
Fly 744 EALRKIKQLEEQKYELQKQMAN-HKPTDNSWGSGAPGTANYTRPFVGSHEEEALLNEMEVTGQAF 807
Fly 808 EDMQEQNSRLIQQLRE---------KDDANFKLMSERIKANQLHKLLREEKTVLEDQM-----AT 858
Fly 859 ATTQIEAMHIVLRKLE------EKERSLQATVASIEKELMLRQQAMEMHK-RKAIESAQSAADLK 916
Fly 917 LHLEKYHAQMKEAQQVVAEKTSSLEAEAYKTKRLQEELAQF 957 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Bre1 | NP_001286950.1 | SMC_prok_B | <235..987 | CDD:274008 | 76/366 (21%) |
AAA_23 | <654..762 | CDD:290211 | 29/122 (24%) | ||
zf-C3HC4_2 | 991..1029 | CDD:290634 | |||
TRIM39 | NP_067076.2 | RAD18 | 20..>179 | CDD:333230 | 31/125 (25%) |
RING-HC_TRIM39_C-IV | 26..69 | CDD:319515 | 3/7 (43%) | ||
RING-HC finger (C3HC4-type) | 29..69 | CDD:319515 | 3/7 (43%) | ||
AtpF | 175..352 | CDD:333342 | 42/218 (19%) | ||
Interaction with CDKN1A. /evidence=ECO:0000269|PubMed:23213251 | 268..337 | 14/70 (20%) | |||
SPRY_PRY_TRIM39 | 335..513 | CDD:293979 | 10/47 (21%) | ||
Interaction with CDKN1A. /evidence=ECO:0000269|PubMed:23213251 | 389..518 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R146 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |